Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC006254.3-201ENST00000603353 884 ntBASIC3.89□□□□□ -1.79
PROM1O43490 AC021646.1-201ENST00000605469 484 ntBASIC3.89□□□□□ -1.79
PROM1O43490 uc_338.34-201ENST00000617467 174 ntBASIC3.89□□□□□ -1.79
PROM1O43490 AC011155.2-201ENST00000623202 216 ntBASIC3.89□□□□□ -1.79
PROM1O43490 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.89□□□□□ -1.79
PROM1O43490 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.89□□□□□ -1.79
PROM1O43490 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.89□□□□□ -1.79
PROM1O43490 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.89□□□□□ -1.79
PROM1O43490 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.89□□□□□ -1.79
PROM1O43490 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PROM1O43490 BDP1P-201ENST00000582658 1990 ntBASIC3.89□□□□□ -1.79
PROM1O43490 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PROM1O43490 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PROM1O43490 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PROM1O43490 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PROM1O43490 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PROM1O43490 SNORA62.3-201ENST00000365110 153 ntBASIC3.88□□□□□ -1.79
PROM1O43490 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PROM1O43490 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PROM1O43490 AL138878.1-201ENST00000405131 347 ntBASIC3.88□□□□□ -1.79
PROM1O43490 PPIAP31-201ENST00000405422 495 ntBASIC3.88□□□□□ -1.79
PROM1O43490 AL137014.1-201ENST00000420490 1226 ntBASIC3.88□□□□□ -1.79
PROM1O43490 AL358472.1-201ENST00000431295 329 ntBASIC3.88□□□□□ -1.79
PROM1O43490 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.88□□□□□ -1.79
PROM1O43490 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.88□□□□□ -1.79
PROM1O43490 AC236972.2-201ENST00000434979 310 ntBASIC3.88□□□□□ -1.79
PROM1O43490 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.88□□□□□ -1.79
PROM1O43490 HMGB1P12-201ENST00000438594 598 ntBASIC3.88□□□□□ -1.79
PROM1O43490 AF228730.2-201ENST00000438784 848 ntBASIC3.88□□□□□ -1.79
PROM1O43490 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.88□□□□□ -1.79
PROM1O43490 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.88□□□□□ -1.79
PROM1O43490 Y_RNA.632-201ENST00000459189 102 ntBASIC3.88□□□□□ -1.79
PROM1O43490 SNRPGP3-201ENST00000469405 227 ntBASIC3.88□□□□□ -1.79
PROM1O43490 MTND4P17-201ENST00000470444 350 ntBASIC3.88□□□□□ -1.79
PROM1O43490 VN1R17P-201ENST00000472048 1090 ntBASIC3.88□□□□□ -1.79
PROM1O43490 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.88□□□□□ -1.79
PROM1O43490 RN7SL271P-201ENST00000487601 295 ntBASIC3.88□□□□□ -1.79
PROM1O43490 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.88□□□□□ -1.79
PROM1O43490 RNU7-143P-201ENST00000516781 65 ntBASIC3.88□□□□□ -1.79
PROM1O43490 RNU6-273P-201ENST00000516937 96 ntBASIC3.88□□□□□ -1.79
PROM1O43490 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.88□□□□□ -1.79
PROM1O43490 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.88□□□□□ -1.79
PROM1O43490 MTND4P7-201ENST00000523876 130 ntBASIC3.88□□□□□ -1.79
PROM1O43490 AP003072.1-201ENST00000531740 145 ntBASIC3.88□□□□□ -1.79
PROM1O43490 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.88□□□□□ -1.79
PROM1O43490 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.88□□□□□ -1.79
PROM1O43490 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.88□□□□□ -1.79
PROM1O43490 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.88□□□□□ -1.79
PROM1O43490 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.88□□□□□ -1.79
PROM1O43490 AC012443.1-201ENST00000605605 231 ntBASIC3.88□□□□□ -1.79
PROM1O43490 MIR7151-201ENST00000617477 60 ntBASIC3.88□□□□□ -1.79
PROM1O43490 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.88□□□□□ -1.79
PROM1O43490 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PROM1O43490 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PROM1O43490 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PROM1O43490 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.88□□□□□ -1.79
PROM1O43490 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PROM1O43490 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PROM1O43490 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.87□□□□□ -1.79
PROM1O43490 AC010733.2-201ENST00000589496 5702 ntBASIC3.87□□□□□ -1.79
PROM1O43490 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PROM1O43490 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.87□□□□□ -1.79
PROM1O43490 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PROM1O43490 SNORA60-201ENST00000362396 134 ntBASIC3.87□□□□□ -1.79
PROM1O43490 Y_RNA.162-201ENST00000363683 102 ntBASIC3.87□□□□□ -1.79
PROM1O43490 SNORD115-7-201ENST00000365306 82 ntBASIC3.87□□□□□ -1.79
PROM1O43490 RNU6-754P-201ENST00000391166 107 ntBASIC3.87□□□□□ -1.79
PROM1O43490 AL583834.1-201ENST00000406943 343 ntBASIC3.87□□□□□ -1.79
PROM1O43490 RNU2-71P-201ENST00000411395 189 ntBASIC3.87□□□□□ -1.79
PROM1O43490 BX323014.1-201ENST00000412876 237 ntBASIC3.87□□□□□ -1.79
PROM1O43490 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.87□□□□□ -1.79
PROM1O43490 SAR1AP4-201ENST00000429225 591 ntBASIC3.87□□□□□ -1.79
PROM1O43490 MRPS18BP2-201ENST00000434310 759 ntBASIC3.87□□□□□ -1.79
PROM1O43490 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.87□□□□□ -1.79
PROM1O43490 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.87□□□□□ -1.79
PROM1O43490 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PROM1O43490 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.87□□□□□ -1.79
PROM1O43490 AL162151.2-201ENST00000448875 158 ntBASIC3.87□□□□□ -1.79
PROM1O43490 ANP32BP2-201ENST00000454525 545 ntBASIC3.87□□□□□ -1.79
PROM1O43490 RNU7-180P-201ENST00000459240 63 ntBASIC3.87□□□□□ -1.79
PROM1O43490 RN7SL542P-201ENST00000467147 294 ntBASIC3.87□□□□□ -1.79
PROM1O43490 RPL23AP11-201ENST00000475260 469 ntBASIC3.87□□□□□ -1.79
PROM1O43490 RN7SL132P-201ENST00000478131 296 ntBASIC3.87□□□□□ -1.79
PROM1O43490 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.87□□□□□ -1.79
PROM1O43490 AC083904.1-201ENST00000487828 231 ntBASIC3.87□□□□□ -1.79
PROM1O43490 RPL23AP55-201ENST00000498163 452 ntBASIC3.87□□□□□ -1.79
PROM1O43490 AC025554.1-201ENST00000505641 188 ntBASIC3.87□□□□□ -1.79
PROM1O43490 AC104806.1-201ENST00000508720 308 ntBASIC3.87□□□□□ -1.79
PROM1O43490 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.87□□□□□ -1.79
PROM1O43490 AC108078.2-201ENST00000510750 236 ntBASIC3.87□□□□□ -1.79
PROM1O43490 Y_RNA.691-201ENST00000516611 103 ntBASIC3.87□□□□□ -1.79
PROM1O43490 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.87□□□□□ -1.79
PROM1O43490 AC109635.4-202ENST00000531666 412 ntBASIC3.87□□□□□ -1.79
PROM1O43490 AP000763.2-201ENST00000540641 163 ntBASIC3.87□□□□□ -1.79
PROM1O43490 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.87□□□□□ -1.79
PROM1O43490 MIR5583-1-201ENST00000580941 59 ntBASIC3.87□□□□□ -1.79
PROM1O43490 MIR4444-1-201ENST00000581696 74 ntBASIC3.87□□□□□ -1.79
PROM1O43490 MIR4444-2-201ENST00000584390 74 ntBASIC3.87□□□□□ -1.79
PROM1O43490 AL022099.1-201ENST00000604551 712 ntBASIC3.87□□□□□ -1.79
PROM1O43490 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms