Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
PHGDHO43175 RNU6-1197P-201ENST00000391183 107 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.84□□□□□ -1.79
PHGDHO43175 HLFP1-201ENST00000402375 499 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.84□□□□□ -1.79
PHGDHO43175 RNA5SP118-201ENST00000410385 109 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 VN1R34P-201ENST00000447387 883 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 AC104058.1-201ENST00000448028 297 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.84□□□□□ -1.79
PHGDHO43175 RN7SL93P-201ENST00000463035 293 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 TRBV1-201ENST00000476502 284 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 AL160314.1-201ENST00000490836 438 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 RPL38P4-201ENST00000502376 214 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 AC025465.4-201ENST00000513422 638 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 APOOP4-201ENST00000513530 597 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.84□□□□□ -1.79
PHGDHO43175 RNA5SP208-201ENST00000516156 78 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.84□□□□□ -1.79
PHGDHO43175 AF235103.2-201ENST00000525753 346 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.84□□□□□ -1.79
PHGDHO43175 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.84□□□□□ -1.79
PHGDHO43175 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.84□□□□□ -1.79
PHGDHO43175 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.84□□□□□ -1.79
PHGDHO43175 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.84□□□□□ -1.79
PHGDHO43175 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.84□□□□□ -1.79
PHGDHO43175 AL138976.2-201ENST00000563989 694 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.84□□□□□ -1.79
PHGDHO43175 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.84□□□□□ -1.79
PHGDHO43175 BNIP3P9-201ENST00000603714 553 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 AL035413.2-201ENST00000604801 525 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 MIR6867-201ENST00000610636 67 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 MIR378J-201ENST00000611988 109 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
PHGDHO43175 AL110115.1-201ENST00000614396 364 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 U6.42-201ENST00000618440 107 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.84□□□□□ -1.79
PHGDHO43175 RPS4XP5-202ENST00000449995 1334 ntBASIC3.84□□□□□ -1.79
PHGDHO43175 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PHGDHO43175 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PHGDHO43175 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PHGDHO43175 RLIMP1-201ENST00000339626 1680 ntBASIC3.84□□□□□ -1.8
PHGDHO43175 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PHGDHO43175 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PHGDHO43175 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
PHGDHO43175 AL133383.2-201ENST00000622958 2336 ntBASIC3.83□□□□□ -1.8
PHGDHO43175 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PHGDHO43175 RNU4-66P-201ENST00000365199 138 ntBASIC3.83□□□□□ -1.8
PHGDHO43175 RNU6-373P-201ENST00000411247 98 ntBASIC3.83□□□□□ -1.8
PHGDHO43175 RAB28P1-201ENST00000411517 641 ntBASIC3.83□□□□□ -1.8
PHGDHO43175 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.83□□□□□ -1.8
PHGDHO43175 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.83□□□□□ -1.8
PHGDHO43175 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.83□□□□□ -1.8
PHGDHO43175 AL592045.1-201ENST00000429867 352 ntBASIC3.83□□□□□ -1.8
PHGDHO43175 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.83□□□□□ -1.8
PHGDHO43175 NDUFB4P6-201ENST00000436819 366 ntBASIC3.83□□□□□ -1.8
PHGDHO43175 PIGFP3-201ENST00000441918 722 ntBASIC3.83□□□□□ -1.8
PHGDHO43175 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.83□□□□□ -1.8
PHGDHO43175 MTND3P16-201ENST00000452205 344 ntBASIC3.83□□□□□ -1.8
PHGDHO43175 KC877373.1-201ENST00000479066 408 ntBASIC3.83□□□□□ -1.8
PHGDHO43175 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.83□□□□□ -1.8
PHGDHO43175 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.83□□□□□ -1.8
PHGDHO43175 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.83□□□□□ -1.8
PHGDHO43175 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.83□□□□□ -1.8
PHGDHO43175 RN7SKP13-201ENST00000515933 244 ntBASIC3.83□□□□□ -1.8
PHGDHO43175 RNU6-914P-201ENST00000516749 109 ntBASIC3.83□□□□□ -1.8
PHGDHO43175 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.83□□□□□ -1.8
PHGDHO43175 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.83□□□□□ -1.8
PHGDHO43175 AC053481.4-201ENST00000583164 216 ntBASIC3.83□□□□□ -1.8
PHGDHO43175 AL161798.1-201ENST00000604630 131 ntBASIC3.83□□□□□ -1.8
PHGDHO43175 MIR15A-201ENST00000607334 83 ntBASIC3.83□□□□□ -1.8
PHGDHO43175 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.83□□□□□ -1.8
PHGDHO43175 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PHGDHO43175 DUXAP9-208ENST00000622815 614 ntBASIC3.83□□□□□ -1.8
PHGDHO43175 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.83□□□□□ -1.8
PHGDHO43175 AC244205.2-202ENST00000635781 342 ntBASIC3.83□□□□□ -1.8
PHGDHO43175 MTND1P37-201ENST00000636562 264 ntBASIC3.83□□□□□ -1.8
PHGDHO43175 OR52H1-202ENST00000641796 1061 ntBASIC3.83□□□□□ -1.8
PHGDHO43175 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PHGDHO43175 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
PHGDHO43175 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.83□□□□□ -1.8
PHGDHO43175 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PHGDHO43175 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PHGDHO43175 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PHGDHO43175 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PHGDHO43175 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PHGDHO43175 AC126755.2-208ENST00000327792 462 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 AC138969.1-213ENST00000331436 462 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 Y_RNA.245-201ENST00000364493 95 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PHGDHO43175 MT-TL1-201ENST00000386347 75 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PHGDHO43175 AL139039.1-201ENST00000401900 692 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 RPL21P65-201ENST00000406094 466 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 AL356776.1-201ENST00000406574 447 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 Z98941.1-201ENST00000407764 100 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 RNU2-33P-201ENST00000410344 192 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.82□□□□□ -1.8
PHGDHO43175 AL356095.1-201ENST00000417217 199 ntBASIC3.82□□□□□ -1.8
PHGDHO43175 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms