Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SPTLC1O15269 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.71□□□□□ -1.5
SPTLC1O15269 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SPTLC1O15269 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SPTLC1O15269 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SPTLC1O15269 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.71□□□□□ -1.5
SPTLC1O15269 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SPTLC1O15269 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SPTLC1O15269 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SPTLC1O15269 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SPTLC1O15269 RNU6-804P-201ENST00000384286 107 ntBASIC5.7□□□□□ -1.5
SPTLC1O15269 RNU1-106P-201ENST00000384382 164 ntBASIC5.7□□□□□ -1.5
SPTLC1O15269 RNU6-735P-201ENST00000410612 107 ntBASIC5.7□□□□□ -1.5
SPTLC1O15269 RNU2-51P-201ENST00000410708 197 ntBASIC5.7□□□□□ -1.5
SPTLC1O15269 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.7□□□□□ -1.5
SPTLC1O15269 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.7□□□□□ -1.5
SPTLC1O15269 RPS6P12-201ENST00000432491 726 ntBASIC5.7□□□□□ -1.5
SPTLC1O15269 AC099670.2-201ENST00000435130 321 ntBASIC5.7□□□□□ -1.5
SPTLC1O15269 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.7□□□□□ -1.5
SPTLC1O15269 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.7□□□□□ -1.5
SPTLC1O15269 AL389915.2-201ENST00000454576 441 ntBASIC5.7□□□□□ -1.5
SPTLC1O15269 RPS29P27-201ENST00000463711 170 ntBASIC5.7□□□□□ -1.5
SPTLC1O15269 AC091021.1-201ENST00000468051 388 ntBASIC5.7□□□□□ -1.5
SPTLC1O15269 SNRPCP2-201ENST00000504370 475 ntBASIC5.7□□□□□ -1.5
SPTLC1O15269 SCARNA15.2-201ENST00000516409 127 ntBASIC5.7□□□□□ -1.5
SPTLC1O15269 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.7□□□□□ -1.5
SPTLC1O15269 NDUFB4P11-201ENST00000560510 395 ntBASIC5.7□□□□□ -1.5
SPTLC1O15269 AC023824.2-201ENST00000566185 400 ntBASIC5.7□□□□□ -1.5
SPTLC1O15269 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.7□□□□□ -1.5
SPTLC1O15269 AC090617.3-201ENST00000573670 475 ntBASIC5.7□□□□□ -1.5
SPTLC1O15269 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.7□□□□□ -1.5
SPTLC1O15269 MIR4480-201ENST00000582492 71 ntBASIC5.7□□□□□ -1.5
SPTLC1O15269 AC006116.3-201ENST00000592968 361 ntBASIC5.7□□□□□ -1.5
SPTLC1O15269 AC108738.1-201ENST00000603703 237 ntBASIC5.7□□□□□ -1.5
SPTLC1O15269 AC005046.1-201ENST00000608515 625 ntBASIC5.7□□□□□ -1.5
SPTLC1O15269 AC074101.1-201ENST00000637861 241 ntBASIC5.7□□□□□ -1.5
SPTLC1O15269 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC5.7□□□□□ -1.5
SPTLC1O15269 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SPTLC1O15269 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SPTLC1O15269 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SPTLC1O15269 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SPTLC1O15269 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.7□□□□□ -1.5
SPTLC1O15269 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SPTLC1O15269 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SPTLC1O15269 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SPTLC1O15269 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SPTLC1O15269 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SPTLC1O15269 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SPTLC1O15269 AC116096.1-201ENST00000566804 2314 ntBASIC5.69□□□□□ -1.5
SPTLC1O15269 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SPTLC1O15269 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SPTLC1O15269 Y_RNA.8-201ENST00000362353 102 ntBASIC5.69□□□□□ -1.5
SPTLC1O15269 RNU5E-7P-201ENST00000365290 117 ntBASIC5.69□□□□□ -1.5
SPTLC1O15269 RNU6-937P-201ENST00000384325 106 ntBASIC5.69□□□□□ -1.5
SPTLC1O15269 BTF3L4P2-201ENST00000392798 346 ntBASIC5.69□□□□□ -1.5
SPTLC1O15269 AC245028.1-201ENST00000423259 256 ntBASIC5.69□□□□□ -1.5
SPTLC1O15269 AC007560.1-201ENST00000426912 237 ntBASIC5.69□□□□□ -1.5
SPTLC1O15269 AL356867.1-201ENST00000429623 299 ntBASIC5.69□□□□□ -1.5
SPTLC1O15269 AC124916.1-201ENST00000444020 547 ntBASIC5.69□□□□□ -1.5
SPTLC1O15269 IFNWP4-201ENST00000453148 294 ntBASIC5.69□□□□□ -1.5
SPTLC1O15269 RPL21P104-201ENST00000464143 478 ntBASIC5.69□□□□□ -1.5
SPTLC1O15269 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.69□□□□□ -1.5
SPTLC1O15269 AC083982.1-201ENST00000485679 344 ntBASIC5.69□□□□□ -1.5
SPTLC1O15269 SEPT14P8-201ENST00000508026 178 ntBASIC5.69□□□□□ -1.5
SPTLC1O15269 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
SPTLC1O15269 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.69□□□□□ -1.5
SPTLC1O15269 RN7SKP272-201ENST00000516988 232 ntBASIC5.69□□□□□ -1.5
SPTLC1O15269 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.69□□□□□ -1.5
SPTLC1O15269 AC107918.3-201ENST00000533272 382 ntBASIC5.69□□□□□ -1.5
SPTLC1O15269 AL359219.2-201ENST00000555184 348 ntBASIC5.69□□□□□ -1.5
SPTLC1O15269 MIR4659A-201ENST00000580269 81 ntBASIC5.69□□□□□ -1.5
SPTLC1O15269 AL078605.1-201ENST00000603529 500 ntBASIC5.69□□□□□ -1.5
SPTLC1O15269 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.69□□□□□ -1.5
SPTLC1O15269 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SPTLC1O15269 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.69□□□□□ -1.5
SPTLC1O15269 BCORP1-203ENST00000513194 5093 ntBASIC5.69□□□□□ -1.5
SPTLC1O15269 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
SPTLC1O15269 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.69□□□□□ -1.5
SPTLC1O15269 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SPTLC1O15269 AL034549.2-201ENST00000618285 3373 ntBASIC5.69□□□□□ -1.5
SPTLC1O15269 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SPTLC1O15269 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
SPTLC1O15269 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
SPTLC1O15269 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SPTLC1O15269 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SPTLC1O15269 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SPTLC1O15269 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SPTLC1O15269 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.68□□□□□ -1.5
SPTLC1O15269 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SPTLC1O15269 RNU4-90P-201ENST00000362773 141 ntBASIC5.68□□□□□ -1.5
SPTLC1O15269 RNU6-290P-201ENST00000365212 101 ntBASIC5.68□□□□□ -1.5
SPTLC1O15269 RNA5SP187-201ENST00000384400 119 ntBASIC5.68□□□□□ -1.5
SPTLC1O15269 MIR105-1-201ENST00000385222 81 ntBASIC5.68□□□□□ -1.5
SPTLC1O15269 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SPTLC1O15269 SNORA53-201ENST00000391141 249 ntBASIC5.68□□□□□ -1.5
SPTLC1O15269 HMGN2P27-201ENST00000427352 270 ntBASIC5.68□□□□□ -1.5
SPTLC1O15269 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.68□□□□□ -1.5
SPTLC1O15269 RNU6-496P-201ENST00000516145 99 ntBASIC5.68□□□□□ -1.5
SPTLC1O15269 RNU6-1012P-201ENST00000516606 109 ntBASIC5.68□□□□□ -1.5
SPTLC1O15269 SNORA31.19-201ENST00000517079 126 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms