Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.36□□□□□ -2.03
LSM1O15116 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
LSM1O15116 AC010329.5-201ENST00000623497 2174 ntBASIC2.36□□□□□ -2.03
LSM1O15116 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LSM1O15116 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.35□□□□□ -2.03
LSM1O15116 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LSM1O15116 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.35□□□□□ -2.03
LSM1O15116 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
LSM1O15116 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
LSM1O15116 RNU4-52P-201ENST00000384209 138 ntBASIC2.35□□□□□ -2.03
LSM1O15116 Y_RNA.472-201ENST00000384322 102 ntBASIC2.35□□□□□ -2.03
LSM1O15116 AL356421.1-201ENST00000403255 413 ntBASIC2.35□□□□□ -2.03
LSM1O15116 U3.40-201ENST00000408706 208 ntBASIC2.35□□□□□ -2.03
LSM1O15116 RNU2-49P-201ENST00000410666 184 ntBASIC2.35□□□□□ -2.03
LSM1O15116 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.35□□□□□ -2.03
LSM1O15116 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.35□□□□□ -2.03
LSM1O15116 HMGN2P38-201ENST00000423806 265 ntBASIC2.35□□□□□ -2.03
LSM1O15116 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.35□□□□□ -2.03
LSM1O15116 ARL5AP4-201ENST00000430731 512 ntBASIC2.35□□□□□ -2.03
LSM1O15116 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.35□□□□□ -2.03
LSM1O15116 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.35□□□□□ -2.03
LSM1O15116 OR10R1P-201ENST00000441524 1141 ntBASIC2.35□□□□□ -2.03
LSM1O15116 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LSM1O15116 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.35□□□□□ -2.03
LSM1O15116 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.35□□□□□ -2.03
LSM1O15116 RPL26P9-201ENST00000457466 433 ntBASIC2.35□□□□□ -2.03
LSM1O15116 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.35□□□□□ -2.03
LSM1O15116 AC104629.1-201ENST00000494226 508 ntBASIC2.35□□□□□ -2.03
LSM1O15116 RPS27AP10-201ENST00000496103 208 ntBASIC2.35□□□□□ -2.03
LSM1O15116 RN7SKP24-201ENST00000515888 284 ntBASIC2.35□□□□□ -2.03
LSM1O15116 RNA5SP320-201ENST00000516263 124 ntBASIC2.35□□□□□ -2.03
LSM1O15116 AP003467.2-201ENST00000520175 319 ntBASIC2.35□□□□□ -2.03
LSM1O15116 AC118942.1-201ENST00000529674 1035 ntBASIC2.35□□□□□ -2.03
LSM1O15116 GTF3AP2-201ENST00000557014 266 ntBASIC2.35□□□□□ -2.03
LSM1O15116 OR4K7P-201ENST00000580232 945 ntBASIC2.35□□□□□ -2.03
LSM1O15116 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.35□□□□□ -2.03
LSM1O15116 AL033523.1-201ENST00000605153 153 ntBASIC2.35□□□□□ -2.03
LSM1O15116 AC007349.4-201ENST00000608114 532 ntBASIC2.35□□□□□ -2.03
LSM1O15116 ELF2P3-201ENST00000445099 1506 ntBASIC2.35□□□□□ -2.03
LSM1O15116 AL109809.4-201ENST00000603520 2185 ntBASIC2.34□□□□□ -2.03
LSM1O15116 AC080128.1-201ENST00000474389 1917 ntBASIC2.34□□□□□ -2.03
LSM1O15116 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.34□□□□□ -2.03
LSM1O15116 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
LSM1O15116 MIR21-201ENST00000362134 72 ntBASIC2.34□□□□□ -2.03
LSM1O15116 RNU6-744P-201ENST00000365557 107 ntBASIC2.34□□□□□ -2.03
LSM1O15116 RNU6-1316P-201ENST00000384242 108 ntBASIC2.34□□□□□ -2.03
LSM1O15116 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.34□□□□□ -2.03
LSM1O15116 AL355497.1-201ENST00000406262 551 ntBASIC2.34□□□□□ -2.03
LSM1O15116 TXNP7-201ENST00000406296 293 ntBASIC2.34□□□□□ -2.03
LSM1O15116 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
LSM1O15116 AC096649.2-201ENST00000416186 393 ntBASIC2.34□□□□□ -2.03
LSM1O15116 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.34□□□□□ -2.03
LSM1O15116 SKA2P1-201ENST00000425592 390 ntBASIC2.34□□□□□ -2.03
LSM1O15116 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.34□□□□□ -2.03
LSM1O15116 ZYG11AP1-201ENST00000430329 837 ntBASIC2.34□□□□□ -2.03
LSM1O15116 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.34□□□□□ -2.03
LSM1O15116 MICF-203ENST00000432679 129 ntBASIC2.34□□□□□ -2.03
LSM1O15116 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.34□□□□□ -2.03
LSM1O15116 AC090515.1-201ENST00000465295 476 ntBASIC2.34□□□□□ -2.03
LSM1O15116 AC090255.1-201ENST00000495779 349 ntBASIC2.34□□□□□ -2.03
LSM1O15116 GTF2IP9-201ENST00000502460 301 ntBASIC2.34□□□□□ -2.03
LSM1O15116 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.34□□□□□ -2.03
LSM1O15116 AC021146.8-201ENST00000507455 733 ntBASIC2.34□□□□□ -2.03
LSM1O15116 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.34□□□□□ -2.03
LSM1O15116 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
LSM1O15116 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.34□□□□□ -2.03
LSM1O15116 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.34□□□□□ -2.03
LSM1O15116 AC061975.8-201ENST00000587058 721 ntBASIC2.34□□□□□ -2.03
LSM1O15116 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.34□□□□□ -2.03
LSM1O15116 AL357094.1-201ENST00000603845 844 ntBASIC2.34□□□□□ -2.03
LSM1O15116 AC013562.2-201ENST00000611632 603 ntBASIC2.34□□□□□ -2.03
LSM1O15116 SDR42E1P2-201ENST00000614861 481 ntBASIC2.34□□□□□ -2.03
LSM1O15116 AL031601.2-202ENST00000622650 282 ntBASIC2.34□□□□□ -2.03
LSM1O15116 AC092608.2-201ENST00000624427 218 ntBASIC2.34□□□□□ -2.03
LSM1O15116 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
LSM1O15116 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.34□□□□□ -2.04
LSM1O15116 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
LSM1O15116 AC069528.2-201ENST00000624849 1991 ntBASIC2.34□□□□□ -2.04
LSM1O15116 RNU6-223P-201ENST00000362830 107 ntBASIC2.33□□□□□ -2.04
LSM1O15116 RNU6-778P-201ENST00000363269 103 ntBASIC2.33□□□□□ -2.04
LSM1O15116 MIR518C-201ENST00000384822 101 ntBASIC2.33□□□□□ -2.04
LSM1O15116 RNU6-220P-201ENST00000390919 107 ntBASIC2.33□□□□□ -2.04
LSM1O15116 U3.26-201ENST00000391236 204 ntBASIC2.33□□□□□ -2.04
LSM1O15116 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.33□□□□□ -2.04
LSM1O15116 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.33□□□□□ -2.04
LSM1O15116 MTCYBP38-201ENST00000417160 1123 ntBASIC2.33□□□□□ -2.04
LSM1O15116 AL449283.1-202ENST00000418249 604 ntBASIC2.33□□□□□ -2.04
LSM1O15116 SEPT2P1-201ENST00000419651 180 ntBASIC2.33□□□□□ -2.04
LSM1O15116 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.33□□□□□ -2.04
LSM1O15116 COTL1P1-201ENST00000422309 375 ntBASIC2.33□□□□□ -2.04
LSM1O15116 AC019097.1-201ENST00000424783 735 ntBASIC2.33□□□□□ -2.04
LSM1O15116 USP12PX-201ENST00000432383 1057 ntBASIC2.33□□□□□ -2.04
LSM1O15116 NANOGP2-201ENST00000435391 727 ntBASIC2.33□□□□□ -2.04
LSM1O15116 Z80107.1-201ENST00000436830 412 ntBASIC2.33□□□□□ -2.04
LSM1O15116 RPL35AP22-201ENST00000436855 335 ntBASIC2.33□□□□□ -2.04
LSM1O15116 AC098831.1-201ENST00000440661 216 ntBASIC2.33□□□□□ -2.04
LSM1O15116 OSTCP8-201ENST00000445117 448 ntBASIC2.33□□□□□ -2.04
LSM1O15116 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.33□□□□□ -2.04
LSM1O15116 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.33□□□□□ -2.04
LSM1O15116 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms