Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHB3Q9Y5E6 IGBP1P1-201ENST00000554337 1009 ntBASIC5.61□□□□□ -1.51
PCDHB3Q9Y5E6 AL391261.3-201ENST00000557194 520 ntBASIC5.61□□□□□ -1.51
PCDHB3Q9Y5E6 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHB3Q9Y5E6 MIR4505-201ENST00000582238 73 ntBASIC5.61□□□□□ -1.51
PCDHB3Q9Y5E6 AC005176.2-201ENST00000596933 147 ntBASIC5.61□□□□□ -1.51
PCDHB3Q9Y5E6 AC116447.1-201ENST00000613153 453 ntBASIC5.61□□□□□ -1.51
PCDHB3Q9Y5E6 AC005296.1-201ENST00000616145 209 ntBASIC5.61□□□□□ -1.51
PCDHB3Q9Y5E6 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHB3Q9Y5E6 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
PCDHB3Q9Y5E6 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
PCDHB3Q9Y5E6 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
PCDHB3Q9Y5E6 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHB3Q9Y5E6 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHB3Q9Y5E6 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
PCDHB3Q9Y5E6 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.61□□□□□ -1.51
PCDHB3Q9Y5E6 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHB3Q9Y5E6 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
PCDHB3Q9Y5E6 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 AC083843.2-201ENST00000568248 6253 ntBASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 FTLP6-201ENST00000355274 422 ntBASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 RNU4-80P-201ENST00000363200 141 ntBASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 RNU6-270P-201ENST00000364131 105 ntBASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 AL391361.1-201ENST00000405580 489 ntBASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 RNU6-1001P-201ENST00000411265 100 ntBASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 RPL7AP25-201ENST00000423357 805 ntBASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 BTF3P11-201ENST00000426582 477 ntBASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 AC005154.2-201ENST00000438110 379 ntBASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 RPL10P17-201ENST00000453852 316 ntBASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 RPS17P15-201ENST00000475609 349 ntBASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 AC010265.1-201ENST00000513509 211 ntBASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 MIR1273E-201ENST00000581165 102 ntBASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 DNAJC19P2-201ENST00000593340 302 ntBASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 FO393422.1-201ENST00000603908 708 ntBASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 U4.7-201ENST00000638126 106 ntBASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB3Q9Y5E6 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 AP000756.2-201ENST00000624168 2567 ntBASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 RNA5SP46-201ENST00000362370 120 ntBASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 RNU6-1272P-201ENST00000362776 107 ntBASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 RN7SKP185-201ENST00000362813 326 ntBASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 RNU6-899P-201ENST00000363947 107 ntBASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 RPS15AP5-201ENST00000436276 388 ntBASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 EEF1B2P7-201ENST00000451177 676 ntBASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 AC005042.3-201ENST00000453230 174 ntBASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 RN7SL466P-201ENST00000497546 295 ntBASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 SNRPCP2-201ENST00000504370 475 ntBASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 AC004980.4-201ENST00000513375 203 ntBASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 RNA5SP362-201ENST00000516048 118 ntBASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 AC022441.3-201ENST00000605737 136 ntBASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 MIR6129-201ENST00000616087 109 ntBASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 TUG1_4.1-201ENST00000619464 181 ntBASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 MIR3658-201ENST00000636291 56 ntBASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB3Q9Y5E6 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.59□□□□□ -1.52
PCDHB3Q9Y5E6 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.59□□□□□ -1.52
PCDHB3Q9Y5E6 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
PCDHB3Q9Y5E6 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
PCDHB3Q9Y5E6 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms