Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 RNU4-35P-201ENST00000362588 141 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 Y_RNA.149-201ENST00000363558 117 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 RNU6-99P-201ENST00000364721 107 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 SNORD37.1-201ENST00000390968 65 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AL359634.1-202ENST00000404721 284 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 RNU4-14P-201ENST00000410858 122 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AL353777.1-201ENST00000425552 326 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AC073063.1-201ENST00000434352 607 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AL138787.1-202ENST00000437804 898 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AF228730.2-201ENST00000438784 848 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 RPL32P28-201ENST00000443577 397 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AL133162.1-201ENST00000463228 453 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AC078785.3-201ENST00000476607 425 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AC108022.1-201ENST00000493466 478 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AC106872.2-201ENST00000494303 480 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 HMGB3P17-201ENST00000504195 649 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AC110794.1-201ENST00000505816 425 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 TMEM248P1-201ENST00000510579 951 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 RNU6-1003P-201ENST00000517099 105 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 SUMO2P20-201ENST00000520803 283 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 NCAPGP2-201ENST00000557911 754 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 MIR4769-201ENST00000584126 77 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 APOOP1-201ENST00000604695 592 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AC062037.2-201ENST00000610137 73 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AC141273.2-201ENST00000618989 130 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AC138627.2-201ENST00000624202 601 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 AC090337.1-201ENST00000579651 2074 ntBASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NOTCH3Q9UM47 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 MTND5P19-201ENST00000424872 1794 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 NACAP2-201ENST00000318548 624 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 RNU6-831P-201ENST00000384548 107 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 AL031121.1-201ENST00000406553 254 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 MIR548F5-201ENST00000408421 86 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 RNU6-954P-201ENST00000411355 107 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 HMGB3P2-201ENST00000411913 584 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 AL356968.1-201ENST00000416622 474 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 RPL7P10-201ENST00000417407 739 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 AL606489.2-201ENST00000433886 234 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 SNRPEP7-201ENST00000438350 220 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 AC127537.2-201ENST00000439258 465 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 DDX3P2-201ENST00000446138 111 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 AC104058.1-201ENST00000448028 297 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 RPL26P28-201ENST00000451325 435 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 RBMY2UP-201ENST00000453474 324 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 AC104308.1-201ENST00000454621 333 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 RPL21P10-201ENST00000463521 490 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 RPL21P99-201ENST00000480369 423 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 VN1R104P-201ENST00000505115 1009 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 HMGB1P28-201ENST00000507778 552 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 BTG4P1-201ENST00000510421 183 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 RPL39P5-202ENST00000512505 151 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 Y_RNA.668-201ENST00000516233 93 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 RNU6-864P-201ENST00000516256 108 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 RNU2-46P-201ENST00000517038 113 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 HMGB1P19-201ENST00000517578 577 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 STX3-204ENST00000530221 534 ntTSL 5 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 AP001180.3-201ENST00000582221 145 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 OR10AB1P-201ENST00000609613 938 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 ZNF734P-201ENST00000419494 1534 ntBASIC2.82□□□□□ -1.96
NOTCH3Q9UM47 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms