Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 AP005432.2-201ENST00000608162 586 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 AC119674.1-207ENST00000641355 633 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 AC107068.1-201ENST00000563286 4218 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 Z73965.1-201ENST00000623412 2297 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 AL590240.1-201ENST00000334118 313 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 RNA5SP447-201ENST00000363749 119 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 SNORD113.2-201ENST00000364166 89 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 RNU1-115P-201ENST00000365329 160 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 RNU6-1074P-201ENST00000383995 104 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 Y_RNA.452-201ENST00000384202 108 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 RNU6-607P-201ENST00000411283 108 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 RPL21P90-201ENST00000415692 466 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 USMG5P1-201ENST00000425964 177 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 USP9YP30-201ENST00000430729 455 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 HMGB1P27-201ENST00000431429 603 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 HSFY6P-201ENST00000445573 403 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 HSPE1P6-201ENST00000479457 291 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 APOOP4-201ENST00000513530 597 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 AC015795.1-201ENST00000513669 327 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 SNRPGP16-201ENST00000533275 226 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 AC004817.2-201ENST00000561794 651 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 LRRC37A5P-203ENST00000580181 585 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 AC023575.1-201ENST00000580510 358 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 AC023043.4-201ENST00000612081 449 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 AL732372.2-225ENST00000642124 456 ntBASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CDC42EP3Q9UKI2 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 AC138393.1-203ENST00000327086 343 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 RNU1-64P-201ENST00000365443 163 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 Y_RNA.364-201ENST00000365532 101 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 RNU6-1329P-201ENST00000365664 107 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 SNORA70.10-201ENST00000384515 134 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 MIR578-201ENST00000384828 96 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 HSPE1P8-201ENST00000406997 288 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 RNU6-293P-201ENST00000411259 106 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 AL513331.1-201ENST00000411908 397 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 HMGB3P2-201ENST00000411913 584 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 AC008267.5-201ENST00000424928 265 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 AC009238.2-201ENST00000431026 355 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 BX323845.1-201ENST00000432417 179 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 AC109327.1-201ENST00000471666 403 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 RNU6-699P-201ENST00000517081 110 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 RPL23AP53-201ENST00000521854 457 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 OR8R1P-201ENST00000543943 764 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 AC091516.1-201ENST00000549191 703 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 MIR3149-201ENST00000584629 83 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 FAM27B-201ENST00000610601 213 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 AL023881.1-201ENST00000621088 301 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 ZNF285B-201ENST00000561698 1767 ntBASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.99□□□□□ -1.77
CDC42EP3Q9UKI2 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms