Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 RPL30P9-201ENST00000465586 330 ntBASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 AL121769.1-201ENST00000469473 401 ntBASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 AC108729.2-201ENST00000476543 840 ntBASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 AC068781.1-201ENST00000488231 618 ntBASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 RN7SL274P-201ENST00000492268 272 ntBASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 HMGN1P28-201ENST00000521340 364 ntBASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 AL161729.4-201ENST00000604650 476 ntBASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 AC004520.1-201ENST00000608362 1413 ntBASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 AC009487.4-201ENST00000624969 3585 ntBASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
VPS29Q9UBQ0 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 RNA5SP125-201ENST00000364843 120 ntBASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 RNA5SP88-201ENST00000365560 109 ntBASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 AC019129.1-201ENST00000403786 261 ntBASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 AL356131.1-201ENST00000405826 414 ntBASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 RNU2-28P-201ENST00000410457 189 ntBASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 RNA5SP270-201ENST00000411361 118 ntBASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 RAC1P8-201ENST00000427086 527 ntBASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 MTCYBP45-201ENST00000435243 565 ntBASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 AC234064.1-201ENST00000436312 247 ntBASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 RNFT1P2-201ENST00000443064 757 ntBASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 USP9YP34-201ENST00000453983 808 ntBASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 MTCO2P9-201ENST00000503214 694 ntBASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 AC098591.2-201ENST00000510152 315 ntBASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 AC090502.2-201ENST00000549267 280 ntBASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 AC091544.4-201ENST00000555268 342 ntBASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 HSPE1P3-201ENST00000559254 309 ntBASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 AC067805.1-201ENST00000559344 470 ntBASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 MTND4LP5-201ENST00000605152 292 ntBASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 AC004067.1-201ENST00000608733 700 ntBASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 AC026634.1-201ENST00000634369 198 ntBASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VPS29Q9UBQ0 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 RNU6-839P-201ENST00000363347 108 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 SNORA16.1-201ENST00000364597 132 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AC008173.1-201ENST00000418901 264 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AC246680.2-201ENST00000422106 389 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 HMGN2P19-201ENST00000425149 265 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 ZNF863P-201ENST00000426746 417 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 MTND4LP7-201ENST00000431728 294 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AC124916.1-201ENST00000444020 547 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 NDUFAF4P2-201ENST00000445374 520 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AL353691.1-201ENST00000451332 387 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 FABP5P13-201ENST00000452144 328 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 SUMO2P2-201ENST00000456482 255 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AC055731.1-201ENST00000474387 401 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AC090453.1-201ENST00000495560 436 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AC107393.1-201ENST00000512403 346 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AC007375.1-201ENST00000554513 578 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AL049838.1-201ENST00000563647 981 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AC008121.1-201ENST00000603244 268 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AL021997.1-201ENST00000605757 193 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AC016911.1-201ENST00000613297 452 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 SDR42E1P2-201ENST00000614861 481 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 SDR42E1P4-201ENST00000620894 481 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 uc_338.20-201ENST00000621563 178 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AC073592.7-201ENST00000623659 507 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AC080188.3-201ENST00000624842 748 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AC025048.6-202ENST00000627667 438 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 AC110994.2-201ENST00000635481 492 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 MIR7157-201ENST00000635801 60 ntBASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
VPS29Q9UBQ0 MTND5P29-201ENST00000458676 1807 ntBASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 U8.2-201ENST00000363156 134 ntBASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 AC083799.1-201ENST00000366451 910 ntBASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms