Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MIR208A-201ENST00000362287 71 ntBASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 SNORD67-201ENST00000390833 111 ntBASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 RNU2-8P-201ENST00000410727 190 ntBASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 AC104651.1-201ENST00000427559 735 ntBASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 ELOCP14-201ENST00000428070 331 ntBASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 ELOCP7-201ENST00000439968 331 ntBASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 UBE2D3P4-201ENST00000441973 436 ntBASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 HMGB3P8-201ENST00000449709 577 ntBASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 RN7SL20P-201ENST00000488827 297 ntBASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 SNORA31.3-201ENST00000516029 96 ntBASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 SUB1P1-201ENST00000524415 382 ntBASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 AC108747.1-201ENST00000609508 535 ntBASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 AC092140.2-201ENST00000618027 521 ntBASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 AC068057.2-201ENST00000624047 895 ntBASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 MIR622-201ENST00000638396 96 ntBASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
BLOC1S4Q9NUP1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 Y_RNA.169-201ENST00000363745 96 ntBASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 U3.19-201ENST00000390893 196 ntBASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 AC007899.1-201ENST00000412776 775 ntBASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 MTND2P18-201ENST00000419962 1030 ntBASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 RPS15AP6-201ENST00000420703 385 ntBASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 SNRPEP9-201ENST00000436794 238 ntBASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 MTATP6P30-201ENST00000443540 664 ntBASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 RNU6-953P-201ENST00000459154 107 ntBASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 MTCO2P29-201ENST00000465212 189 ntBASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 AC233702.1-201ENST00000482905 502 ntBASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 AC006445.1-201ENST00000491925 405 ntBASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 AC114786.4-201ENST00000508771 728 ntBASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 AC107934.1-201ENST00000522215 217 ntBASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 DUXAP4-201ENST00000603046 613 ntBASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 AC112191.3-201ENST00000604371 277 ntBASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 AL031775.1-201ENST00000607014 887 ntBASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 AC104010.1-201ENST00000616889 150 ntBASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 AC108479.2-201ENST00000617314 601 ntBASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 AC110079.1-202ENST00000635213 138 ntBASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
BLOC1S4Q9NUP1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 RNY4P16-201ENST00000364768 94 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 SNORD15B-201ENST00000384714 146 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 SNORA46-201ENST00000384762 135 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 MIR767-201ENST00000390228 109 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 RNU6-817P-201ENST00000391083 104 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 Y_RNA.598-201ENST00000410480 95 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 SEPT2P1-201ENST00000419651 180 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AL645937.1-202ENST00000421799 937 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AL353678.1-201ENST00000422735 741 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AL365496.1-201ENST00000426885 215 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 OR2AS1P-201ENST00000427827 319 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AC119618.1-201ENST00000434191 222 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AC006028.1-201ENST00000438379 402 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 EPS15P1-201ENST00000448836 336 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AC093392.2-201ENST00000450682 337 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 RPL26P9-201ENST00000457466 433 ntBASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.43□□□□□ -1.86
BLOC1S4Q9NUP1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms