Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 Z85995.1-201ENST00000415547 335 ntBASIC2.22□□□□□ -2.05
TREX1Q9NSU2 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 BX322784.1-201ENST00000455793 1077 ntBASIC2.22□□□□□ -2.05
TREX1Q9NSU2 UBE2DNL-203ENST00000474922 222 ntBASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 SCARNA15.2-201ENST00000516409 127 ntBASIC2.22□□□□□ -2.05
TREX1Q9NSU2 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AL132657.2-201ENST00000564417 358 ntBASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AC023158.2-201ENST00000614876 543 ntBASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AL158163.2-201ENST00000619110 700 ntBASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AC002550.2-201ENST00000621246 394 ntBASIC2.22□□□□□ -2.05
TREX1Q9NSU2 MIR6852-201ENST00000621699 66 ntBASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AL159972.1-201ENST00000625150 448 ntBASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
TREX1Q9NSU2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.21□□□□□ -2.06
TREX1Q9NSU2 MTND5P6-201ENST00000422338 1798 ntBASIC2.21□□□□□ -2.06
TREX1Q9NSU2 AC007785.2-201ENST00000598627 1916 ntBASIC2.21□□□□□ -2.06
TREX1Q9NSU2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.21□□□□□ -2.06
TREX1Q9NSU2 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
TREX1Q9NSU2 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
TREX1Q9NSU2 RNU6-298P-201ENST00000390888 96 ntBASIC2.21□□□□□ -2.06
TREX1Q9NSU2 HMGB1P17-201ENST00000403495 628 ntBASIC2.21□□□□□ -2.06
TREX1Q9NSU2 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.21□□□□□ -2.06
TREX1Q9NSU2 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.21□□□□□ -2.06
TREX1Q9NSU2 AC007560.1-201ENST00000426912 237 ntBASIC2.21□□□□□ -2.06
TREX1Q9NSU2 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.21□□□□□ -2.06
TREX1Q9NSU2 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.21□□□□□ -2.06
TREX1Q9NSU2 Z80107.1-201ENST00000436830 412 ntBASIC2.21□□□□□ -2.06
TREX1Q9NSU2 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.21□□□□□ -2.06
TREX1Q9NSU2 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.21□□□□□ -2.06
TREX1Q9NSU2 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.21□□□□□ -2.06
TREX1Q9NSU2 RPL18AP17-201ENST00000455326 198 ntBASIC2.21□□□□□ -2.06
TREX1Q9NSU2 LARP1BP2-201ENST00000486594 519 ntBASIC2.21□□□□□ -2.06
TREX1Q9NSU2 GZMAP1-201ENST00000503054 631 ntBASIC2.21□□□□□ -2.06
TREX1Q9NSU2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.21□□□□□ -2.06
TREX1Q9NSU2 RNA5SP200-201ENST00000516360 103 ntBASIC2.21□□□□□ -2.06
TREX1Q9NSU2 RNU6-467P-201ENST00000517027 110 ntBASIC2.21□□□□□ -2.06
TREX1Q9NSU2 RNU6-840P-201ENST00000517275 65 ntBASIC2.21□□□□□ -2.06
TREX1Q9NSU2 AC004944.1-201ENST00000517807 3059 ntBASIC2.21□□□□□ -2.06
TREX1Q9NSU2 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.21□□□□□ -2.06
TREX1Q9NSU2 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.21□□□□□ -2.06
TREX1Q9NSU2 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.21□□□□□ -2.06
TREX1Q9NSU2 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TREX1Q9NSU2 AC009127.3-201ENST00000570531 403 ntBASIC2.21□□□□□ -2.06
TREX1Q9NSU2 RPS3AP23-202ENST00000574601 686 ntBASIC2.21□□□□□ -2.06
TREX1Q9NSU2 AC007938.3-201ENST00000604965 623 ntBASIC2.21□□□□□ -2.06
TREX1Q9NSU2 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.21□□□□□ -2.06
TREX1Q9NSU2 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.21□□□□□ -2.06
TREX1Q9NSU2 AL603758.1-201ENST00000618654 241 ntBASIC2.21□□□□□ -2.06
TREX1Q9NSU2 ZNF658B-202ENST00000615961 3375 ntBASIC2.21□□□□□ -2.06
TREX1Q9NSU2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.2□□□□□ -2.06
TREX1Q9NSU2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TREX1Q9NSU2 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
TREX1Q9NSU2 AC022336.2-201ENST00000568966 2538 ntBASIC2.2□□□□□ -2.06
TREX1Q9NSU2 MIRLET7G-201ENST00000362280 84 ntBASIC2.2□□□□□ -2.06
TREX1Q9NSU2 RNU5E-8P-201ENST00000363502 116 ntBASIC2.2□□□□□ -2.06
TREX1Q9NSU2 RN7SKP226-201ENST00000364912 300 ntBASIC2.2□□□□□ -2.06
TREX1Q9NSU2 SNORA80E-201ENST00000384744 137 ntBASIC2.2□□□□□ -2.06
TREX1Q9NSU2 RNU6-952P-201ENST00000391164 108 ntBASIC2.2□□□□□ -2.06
TREX1Q9NSU2 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.2□□□□□ -2.06
TREX1Q9NSU2 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.2□□□□□ -2.06
TREX1Q9NSU2 BX119904.4-201ENST00000424402 301 ntBASIC2.2□□□□□ -2.06
TREX1Q9NSU2 AC007919.1-201ENST00000429380 217 ntBASIC2.2□□□□□ -2.06
TREX1Q9NSU2 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.2□□□□□ -2.06
TREX1Q9NSU2 GTF2IP3-201ENST00000433887 494 ntBASIC2.2□□□□□ -2.06
TREX1Q9NSU2 AP000949.1-201ENST00000438328 629 ntBASIC2.2□□□□□ -2.06
TREX1Q9NSU2 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.2□□□□□ -2.06
TREX1Q9NSU2 AC002381.1-201ENST00000447049 280 ntBASIC2.2□□□□□ -2.06
TREX1Q9NSU2 RNU7-136P-201ENST00000458819 69 ntBASIC2.2□□□□□ -2.06
TREX1Q9NSU2 RPL23AP49-201ENST00000492925 468 ntBASIC2.2□□□□□ -2.06
TREX1Q9NSU2 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.2□□□□□ -2.06
TREX1Q9NSU2 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.2□□□□□ -2.06
TREX1Q9NSU2 AC010486.1-201ENST00000511793 424 ntBASIC2.2□□□□□ -2.06
TREX1Q9NSU2 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.2□□□□□ -2.06
TREX1Q9NSU2 RNY4P37-201ENST00000516225 96 ntBASIC2.2□□□□□ -2.06
TREX1Q9NSU2 RNU6-714P-201ENST00000516963 103 ntBASIC2.2□□□□□ -2.06
TREX1Q9NSU2 AL132857.1-201ENST00000555180 708 ntBASIC2.2□□□□□ -2.06
TREX1Q9NSU2 MTND3P13-201ENST00000574391 343 ntBASIC2.2□□□□□ -2.06
TREX1Q9NSU2 ISCA1P3-201ENST00000577104 373 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms