Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX4Q9NQI0 AC108059.3-201ENST00000456388 214 ntBASIC3.59□□□□□ -1.83
DDX4Q9NQI0 HMGN1P18-201ENST00000457642 277 ntBASIC3.59□□□□□ -1.83
DDX4Q9NQI0 snoU13.4-201ENST00000458916 104 ntBASIC3.59□□□□□ -1.83
DDX4Q9NQI0 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX4Q9NQI0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.59□□□□□ -1.83
DDX4Q9NQI0 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX4Q9NQI0 AC022483.1-201ENST00000514020 567 ntBASIC3.59□□□□□ -1.83
DDX4Q9NQI0 AP003122.4-201ENST00000530980 758 ntBASIC3.59□□□□□ -1.83
DDX4Q9NQI0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.59□□□□□ -1.83
DDX4Q9NQI0 AL391156.1-201ENST00000554965 554 ntBASIC3.59□□□□□ -1.83
DDX4Q9NQI0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.59□□□□□ -1.83
DDX4Q9NQI0 MIR4474-201ENST00000579189 78 ntBASIC3.59□□□□□ -1.83
DDX4Q9NQI0 HMGN1P30-201ENST00000589286 268 ntBASIC3.59□□□□□ -1.83
DDX4Q9NQI0 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.59□□□□□ -1.83
DDX4Q9NQI0 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.59□□□□□ -1.83
DDX4Q9NQI0 DUXAP4-201ENST00000603046 613 ntBASIC3.59□□□□□ -1.83
DDX4Q9NQI0 AC015871.2-201ENST00000603605 948 ntBASIC3.59□□□□□ -1.83
DDX4Q9NQI0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.59□□□□□ -1.83
DDX4Q9NQI0 AC007318.2-201ENST00000620999 243 ntBASIC3.59□□□□□ -1.83
DDX4Q9NQI0 AL138713.1-201ENST00000624026 2130 ntBASIC3.59□□□□□ -1.84
DDX4Q9NQI0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
DDX4Q9NQI0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.58□□□□□ -1.84
DDX4Q9NQI0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.58□□□□□ -1.84
DDX4Q9NQI0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.58□□□□□ -1.84
DDX4Q9NQI0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
DDX4Q9NQI0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
DDX4Q9NQI0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
DDX4Q9NQI0 RNU5A-8P-201ENST00000364102 114 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 RNU6-637P-201ENST00000384050 107 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 RNU5A-6P-201ENST00000384136 116 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 Y_RNA.582-201ENST00000391023 95 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 RNU1-101P-201ENST00000391171 127 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 RNU6-192P-201ENST00000391253 100 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 RNU2-66P-201ENST00000410650 161 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 RNU6-516P-201ENST00000411381 104 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 HMGB3P23-201ENST00000414981 585 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 C1DP2-201ENST00000418167 426 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 USP9YP36-201ENST00000424581 829 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 AC010975.2-201ENST00000427781 588 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 AC009961.2-201ENST00000435771 251 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 AL031667.1-201ENST00000440222 725 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX4Q9NQI0 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.58□□□□□ -1.84
DDX4Q9NQI0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.58□□□□□ -1.84
DDX4Q9NQI0 RPS23P3-201ENST00000470993 430 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX4Q9NQI0 RN7SL20P-201ENST00000488827 297 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 AC138853.1-201ENST00000503549 823 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 AC021146.1-201ENST00000511202 716 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 RNU6-720P-201ENST00000516363 108 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 RN7SKP272-201ENST00000516988 232 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
DDX4Q9NQI0 AC123904.2-201ENST00000548059 300 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.58□□□□□ -1.84
DDX4Q9NQI0 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.58□□□□□ -1.84
DDX4Q9NQI0 MTND1P15-201ENST00000579262 949 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 AC068790.6-201ENST00000602558 258 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 AP001429.1-201ENST00000602568 530 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 XIAPP1-201ENST00000603162 600 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.58□□□□□ -1.84
DDX4Q9NQI0 AC008498.1-201ENST00000613012 531 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 AL159972.1-201ENST00000625150 448 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 AC073476.4-201ENST00000628409 72 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
DDX4Q9NQI0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.58□□□□□ -1.84
DDX4Q9NQI0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.58□□□□□ -1.84
DDX4Q9NQI0 AL136164.4-201ENST00000625013 2135 ntBASIC3.58□□□□□ -1.84
DDX4Q9NQI0 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
DDX4Q9NQI0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
DDX4Q9NQI0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
DDX4Q9NQI0 RNU6-223P-201ENST00000362830 107 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
DDX4Q9NQI0 SNORA18.3-201ENST00000384122 132 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 MIR19A-201ENST00000384878 82 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 EI24P2-201ENST00000397776 1076 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 RNU2-43P-201ENST00000410306 190 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.57□□□□□ -1.84
DDX4Q9NQI0 ARPC3P1-201ENST00000437218 533 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.57□□□□□ -1.84
DDX4Q9NQI0 TPT1P14-201ENST00000448018 505 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.57□□□□□ -1.84
DDX4Q9NQI0 GAPDHP17-201ENST00000449858 1001 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 RPS24P6-201ENST00000452670 400 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.57□□□□□ -1.84
DDX4Q9NQI0 MTND1P12-201ENST00000455231 147 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 RNU7-59P-201ENST00000459101 61 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 MTCO2P29-201ENST00000465212 189 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AC004924.1-201ENST00000480160 781 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 MTND1P3-201ENST00000484956 952 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.57□□□□□ -1.84
DDX4Q9NQI0 RNA5SP356-201ENST00000515972 94 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 RNU6-798P-201ENST00000516912 103 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 MTCO2P4-201ENST00000517968 247 ntBASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.57□□□□□ -1.84
DDX4Q9NQI0 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.57□□□□□ -1.84
DDX4Q9NQI0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms