Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.14□□□□□ -1.91
SIX2Q9NPC8 AL121603.1-201ENST00000553815 142 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.14□□□□□ -1.91
SIX2Q9NPC8 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.14□□□□□ -1.91
SIX2Q9NPC8 VN1R79P-201ENST00000593540 513 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 XIAPP1-201ENST00000603162 600 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 AC012468.1-201ENST00000604888 430 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 TUG1_1.1-201ENST00000610654 145 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 AL020991.1-201ENST00000612314 373 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 AC009268.2-201ENST00000621925 457 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 AC091953.5-201ENST00000622919 233 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SIX2Q9NPC8 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.14□□□□□ -1.91
SIX2Q9NPC8 EXOC5P1-201ENST00000510543 1969 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 MTCO1P9-201ENST00000505577 1534 ntBASIC3.14□□□□□ -1.91
SIX2Q9NPC8 MTND5P1-201ENST00000445440 1375 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SIX2Q9NPC8 OR5J1P-201ENST00000313544 939 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 SNORA38.1-201ENST00000364172 131 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.13□□□□□ -1.91
SIX2Q9NPC8 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.13□□□□□ -1.91
SIX2Q9NPC8 MIR135A2-201ENST00000384854 100 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 FCF1P9-201ENST00000412546 282 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.13□□□□□ -1.91
SIX2Q9NPC8 PIGFP2-201ENST00000421400 651 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AC012498.1-201ENST00000424037 437 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.13□□□□□ -1.91
SIX2Q9NPC8 RPL31P35-201ENST00000431058 377 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.13□□□□□ -1.91
SIX2Q9NPC8 HMGN2P21-201ENST00000447764 270 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AP002884.2-201ENST00000471647 395 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.13□□□□□ -1.91
SIX2Q9NPC8 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AL117351.2-201ENST00000513571 157 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.13□□□□□ -1.91
SIX2Q9NPC8 DEFB108A-201ENST00000530110 222 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AL133271.1-201ENST00000538229 291 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AC018630.1-201ENST00000541376 925 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.13□□□□□ -1.91
SIX2Q9NPC8 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.13□□□□□ -1.91
SIX2Q9NPC8 COX6CP3-201ENST00000580869 223 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.13□□□□□ -1.91
SIX2Q9NPC8 KC877982.1-201ENST00000602313 470 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AC012119.1-201ENST00000603184 222 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AC024220.1-201ENST00000603675 484 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AC007038.2-201ENST00000608095 740 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AC092794.1-201ENST00000612734 582 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 uc_338.12-201ENST00000616344 181 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 MIR8057-201ENST00000620957 69 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AL353748.2-201ENST00000622148 471 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 MIR3651-201ENST00000630427 90 ntBASIC3.13□□□□□ -1.91
SIX2Q9NPC8 AC005832.2-201ENST00000538921 1430 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SIX2Q9NPC8 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SIX2Q9NPC8 RNU6-335P-201ENST00000364563 113 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 Y_RNA.296-201ENST00000364930 108 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 RNU6-629P-201ENST00000384061 103 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 MIR181A2-201ENST00000384863 110 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SIX2Q9NPC8 GSTA9P-201ENST00000406231 611 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 SNORA11-201ENST00000408789 128 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 AC127391.1-201ENST00000411737 98 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 CCDC58P2-201ENST00000417131 366 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.12□□□□□ -1.91
SIX2Q9NPC8 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.12□□□□□ -1.91
SIX2Q9NPC8 MTND3P21-201ENST00000433774 331 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 VDAC1P3-201ENST00000434069 851 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 AL645939.1-201ENST00000453429 797 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SIX2Q9NPC8 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.12□□□□□ -1.91
SIX2Q9NPC8 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SIX2Q9NPC8 AC023141.12-201ENST00000512399 199 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 RN7SKP244-201ENST00000516513 307 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 Vault.3-201ENST00000516676 95 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.12□□□□□ -1.91
SIX2Q9NPC8 AC103783.1-201ENST00000520506 373 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.12□□□□□ -1.91
SIX2Q9NPC8 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.12□□□□□ -1.91
SIX2Q9NPC8 AP000857.1-201ENST00000532151 543 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 TRAV37-201ENST00000553906 342 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.12□□□□□ -1.91
SIX2Q9NPC8 AL133153.1-201ENST00000557756 303 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 AC027807.1-201ENST00000559921 996 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.12□□□□□ -1.91
SIX2Q9NPC8 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.12□□□□□ -1.91
SIX2Q9NPC8 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.12□□□□□ -1.91
SIX2Q9NPC8 AC004908.2-201ENST00000609090 574 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 AC245517.5-201ENST00000611529 162 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 AC090970.3-201ENST00000612566 866 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 AL133173.2-201ENST00000614270 90 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 ATP5A1P2-202ENST00000616464 443 ntBASIC3.12□□□□□ -1.91
SIX2Q9NPC8 MIR6130-201ENST00000619419 109 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms