Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 YME1L1P1-201ENST00000429435 297 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 AC005019.1-201ENST00000436455 431 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDH9Q9HC56 PRDX3P3-201ENST00000447765 522 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 AL136380.1-201ENST00000447970 162 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 AC108059.3-201ENST00000456388 214 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 AL359385.1-201ENST00000456509 365 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDH9Q9HC56 RNU7-59P-201ENST00000459101 61 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 AC008155.2-201ENST00000464337 397 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 AC007182.2-201ENST00000489251 402 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 RPS15AP36-201ENST00000492022 382 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 AC026801.2-201ENST00000515352 425 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 RNA5SP217-201ENST00000515959 91 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 RNU6-718P-201ENST00000516166 105 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDH9Q9HC56 HMGN1P28-201ENST00000521340 364 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDH9Q9HC56 DEFB108D-201ENST00000527787 222 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDH9Q9HC56 AC011611.1-201ENST00000552179 197 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.38□□□□□ -1.87
PCDH9Q9HC56 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDH9Q9HC56 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDH9Q9HC56 MIR4474-201ENST00000579189 78 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 AP001094.1-201ENST00000579805 193 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 MIR4276-201ENST00000584832 70 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 AL136363.1-201ENST00000605349 337 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 CR381653.2-201ENST00000624041 768 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 AL157786.1-207ENST00000627771 695 ntBASIC3.38□□□□□ -1.87
PCDH9Q9HC56 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PCDH9Q9HC56 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDH9Q9HC56 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDH9Q9HC56 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDH9Q9HC56 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDH9Q9HC56 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PCDH9Q9HC56 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDH9Q9HC56 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDH9Q9HC56 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDH9Q9HC56 Y_RNA.372-201ENST00000365599 102 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 Y_RNA.409-201ENST00000383990 98 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 RNA5SP171-201ENST00000391071 115 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 RNA5SP44-201ENST00000410446 133 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 MTND1P21-201ENST00000412991 285 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDH9Q9HC56 MTND3P17-201ENST00000416968 344 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 RPL21P66-201ENST00000426566 466 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 AC073464.1-201ENST00000429823 534 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 AC097713.2-201ENST00000430199 356 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 AC002486.1-201ENST00000435098 391 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 MTND1P12-201ENST00000455231 147 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 AL049714.1-201ENST00000466686 347 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDH9Q9HC56 AC004924.1-201ENST00000480160 781 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 SNORA31.20-201ENST00000517111 133 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
PCDH9Q9HC56 AC022616.3-201ENST00000523940 148 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDH9Q9HC56 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDH9Q9HC56 NCAPGP2-201ENST00000557911 754 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDH9Q9HC56 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDH9Q9HC56 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDH9Q9HC56 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDH9Q9HC56 AL022099.1-201ENST00000604551 712 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 Z84480.1-201ENST00000605131 311 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 AC008277.2-201ENST00000605196 797 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 AL450472.3-201ENST00000615578 367 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 uc_338.12-201ENST00000616344 181 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 AC012314.7-201ENST00000619693 93 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDH9Q9HC56 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDH9Q9HC56 AC116096.1-201ENST00000566804 2314 ntBASIC3.37□□□□□ -1.87
PCDH9Q9HC56 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDH9Q9HC56 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDH9Q9HC56 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCDH9Q9HC56 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.36□□□□□ -1.87
PCDH9Q9HC56 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDH9Q9HC56 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDH9Q9HC56 RNU5E-8P-201ENST00000363502 116 ntBASIC3.36□□□□□ -1.87
PCDH9Q9HC56 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDH9Q9HC56 RNU6-456P-201ENST00000384493 107 ntBASIC3.36□□□□□ -1.87
PCDH9Q9HC56 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PCDH9Q9HC56 RPL17P50-201ENST00000396131 546 ntBASIC3.36□□□□□ -1.87
PCDH9Q9HC56 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PCDH9Q9HC56 RNU2-43P-201ENST00000410306 190 ntBASIC3.36□□□□□ -1.87
PCDH9Q9HC56 RNU2-62P-201ENST00000410868 191 ntBASIC3.36□□□□□ -1.87
PCDH9Q9HC56 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PCDH9Q9HC56 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDH9Q9HC56 MTCO2P11-201ENST00000431069 680 ntBASIC3.36□□□□□ -1.87
PCDH9Q9HC56 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.36□□□□□ -1.87
PCDH9Q9HC56 RPL35AP22-201ENST00000436855 335 ntBASIC3.36□□□□□ -1.87
PCDH9Q9HC56 AC004866.2-201ENST00000438285 481 ntBASIC3.36□□□□□ -1.87
PCDH9Q9HC56 AL358232.1-201ENST00000448030 501 ntBASIC3.36□□□□□ -1.87
PCDH9Q9HC56 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDH9Q9HC56 PSPHP1-201ENST00000450062 261 ntBASIC3.36□□□□□ -1.87
PCDH9Q9HC56 SSXP4-201ENST00000451349 245 ntBASIC3.36□□□□□ -1.87
PCDH9Q9HC56 AC010285.1-201ENST00000470580 392 ntBASIC3.36□□□□□ -1.87
PCDH9Q9HC56 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCDH9Q9HC56 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms