Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.79□□□□□ -1.8
USP29Q9HBJ7 DDX3P2-201ENST00000446138 111 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AL162389.1-201ENST00000449233 177 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AC234775.1-201ENST00000454247 670 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 U8.18-201ENST00000459285 133 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 PCBP2P3-201ENST00000509726 843 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.79□□□□□ -1.8
USP29Q9HBJ7 HMGB1P41-201ENST00000520234 440 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AP004371.1-201ENST00000525240 214 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AF235103.2-201ENST00000525753 346 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AP004242.1-201ENST00000533701 349 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AC123904.3-201ENST00000547218 814 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AC055876.1-202ENST00000567053 138 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.79□□□□□ -1.8
USP29Q9HBJ7 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.79□□□□□ -1.8
USP29Q9HBJ7 RMST_8.1-201ENST00000610287 165 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AC012314.7-201ENST00000619693 93 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AC093648.1-201ENST00000623546 606 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AP003122.6-201ENST00000623831 495 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AC024614.3-201ENST00000637860 256 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
USP29Q9HBJ7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.79□□□□□ -1.8
USP29Q9HBJ7 AC006020.1-201ENST00000420179 1854 ntBASIC3.79□□□□□ -1.8
USP29Q9HBJ7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP29Q9HBJ7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP29Q9HBJ7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 RNA5SP42-201ENST00000364278 115 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 RNU4-48P-201ENST00000365559 182 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 AL136372.1-201ENST00000403060 228 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 AL591416.1-201ENST00000404015 867 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 MTHFD2P2-201ENST00000407725 247 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 OR51A5P-201ENST00000415429 942 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 RPL21P112-201ENST00000434403 463 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 SEPT14P3-201ENST00000439401 183 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 CALM1P1-201ENST00000442082 433 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 AL732372.2-207ENST00000445840 183 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 MTND5P20-201ENST00000448677 143 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 MTND3P10-201ENST00000450967 341 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 SEPT14P2-201ENST00000453405 183 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 RPL7P49-201ENST00000471402 708 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 AC126389.1-201ENST00000477436 290 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 AC233702.1-201ENST00000482905 502 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 HMGB1P22-201ENST00000505315 124 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 AC026784.1-201ENST00000507986 352 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 SEPT14P4-201ENST00000513445 186 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 RNU7-51P-201ENST00000516560 62 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 FO082796.1-201ENST00000523795 183 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 AP001646.1-201ENST00000527936 915 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 AC125611.2-201ENST00000551907 647 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 MIR4738-201ENST00000579134 87 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 AC025253.1-201ENST00000613623 543 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 AC015967.1-201ENST00000619893 476 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 AC024940.5-201ENST00000622889 474 ntBASIC3.78□□□□□ -1.8
USP29Q9HBJ7 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP29Q9HBJ7 AC004925.1-201ENST00000624256 2706 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 RPL7P26-201ENST00000333817 754 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 RNU6-1284P-201ENST00000363701 100 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 RNA5SP387-201ENST00000364226 106 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 RNA5SP72-201ENST00000364442 117 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 Y_RNA.333-201ENST00000365274 102 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 MIR34B-201ENST00000385076 84 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 RNU6-876P-201ENST00000391295 104 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 AL354719.1-201ENST00000406535 843 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 RPS3AP24-201ENST00000407896 734 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 UBE2FP1-201ENST00000416536 447 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 PPP1R11P2-201ENST00000423543 382 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 AC091286.1-201ENST00000431233 461 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 RPS24P6-201ENST00000452670 400 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 snoU13.24-201ENST00000458998 104 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 RNU7-63P-201ENST00000459054 62 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms