Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL035423.1-201ENST00000420331 213 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.37□□□□□ -1.87
BRF2Q9HAW0 AC104651.1-201ENST00000427559 735 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 AC010975.2-201ENST00000427781 588 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 MED13P1-201ENST00000428342 171 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 AP000907.1-201ENST00000428428 510 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 HMGB3P12-201ENST00000438745 556 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 MTND4P25-201ENST00000441039 533 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 AC079781.2-201ENST00000446424 169 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.37□□□□□ -1.87
BRF2Q9HAW0 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.37□□□□□ -1.87
BRF2Q9HAW0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.37□□□□□ -1.87
BRF2Q9HAW0 AC004924.1-201ENST00000480160 781 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 AC023194.1-201ENST00000493084 308 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 AC026427.2-201ENST00000506228 536 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 AC117522.1-201ENST00000509821 380 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.37□□□□□ -1.87
BRF2Q9HAW0 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.37□□□□□ -1.87
BRF2Q9HAW0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.37□□□□□ -1.87
BRF2Q9HAW0 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
BRF2Q9HAW0 AP006587.4-201ENST00000526053 529 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 AP000867.2-201ENST00000532468 320 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 AC067852.3-201ENST00000589177 561 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 AC174048.1-201ENST00000603389 144 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 AC012557.2-201ENST00000605919 418 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 MIR7851-201ENST00000610611 160 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.37□□□□□ -1.87
BRF2Q9HAW0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 AC007823.1-201ENST00000569932 1566 ntBASIC3.37□□□□□ -1.87
BRF2Q9HAW0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
BRF2Q9HAW0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
BRF2Q9HAW0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 RNU6-181P-201ENST00000363225 107 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 MIR558-201ENST00000384920 94 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 RNU2-39P-201ENST00000410604 198 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 CYCSP4-201ENST00000429682 331 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 FABP5P13-201ENST00000452144 328 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 RPL23AP67-201ENST00000465341 474 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 AC068587.1-201ENST00000483613 781 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 AC007182.2-201ENST00000489251 402 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 AC105252.1-201ENST00000503089 286 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 RN7SKP18-201ENST00000516005 275 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 SCARNA24.1-201ENST00000516465 137 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 RNU6-677P-201ENST00000516914 101 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 RNU6-445P-201ENST00000516949 107 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 SUB1P2-201ENST00000556401 297 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 NCAPGP2-201ENST00000557911 754 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 AC104763.2-201ENST00000604179 382 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 AC084782.3-201ENST00000612282 578 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 AL592295.2-201ENST00000612578 206 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 AP003122.6-201ENST00000623831 495 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 AC119674.1-207ENST00000641355 633 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 AC103988.1-201ENST00000566382 2177 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
BRF2Q9HAW0 AC110774.1-201ENST00000623567 2018 ntBASIC3.36□□□□□ -1.87
BRF2Q9HAW0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
BRF2Q9HAW0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
BRF2Q9HAW0 FRG1CP-201ENST00000358464 769 ntBASIC3.35□□□□□ -1.87
BRF2Q9HAW0 SNORA14A-201ENST00000364773 135 ntBASIC3.35□□□□□ -1.87
BRF2Q9HAW0 RNU6-282P-201ENST00000365357 103 ntBASIC3.35□□□□□ -1.87
BRF2Q9HAW0 MIR184-201ENST00000384962 84 ntBASIC3.35□□□□□ -1.87
BRF2Q9HAW0 RNU1-101P-201ENST00000391171 127 ntBASIC3.35□□□□□ -1.87
BRF2Q9HAW0 RN7SKP285-201ENST00000410137 318 ntBASIC3.35□□□□□ -1.87
BRF2Q9HAW0 RN7SKP111-201ENST00000410349 271 ntBASIC3.35□□□□□ -1.87
BRF2Q9HAW0 RNU6-55P-201ENST00000411092 107 ntBASIC3.35□□□□□ -1.87
BRF2Q9HAW0 RNU6-954P-201ENST00000411355 107 ntBASIC3.35□□□□□ -1.87
BRF2Q9HAW0 AC073464.1-201ENST00000429823 534 ntBASIC3.35□□□□□ -1.87
BRF2Q9HAW0 RPL23AP30-201ENST00000432419 501 ntBASIC3.35□□□□□ -1.87
BRF2Q9HAW0 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.35□□□□□ -1.87
BRF2Q9HAW0 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.35□□□□□ -1.87
BRF2Q9HAW0 PRDX3P3-201ENST00000447765 522 ntBASIC3.35□□□□□ -1.87
BRF2Q9HAW0 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.35□□□□□ -1.87
BRF2Q9HAW0 HMGB3P8-201ENST00000449709 577 ntBASIC3.35□□□□□ -1.87
BRF2Q9HAW0 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
BRF2Q9HAW0 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.35□□□□□ -1.87
BRF2Q9HAW0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.35□□□□□ -1.87
BRF2Q9HAW0 AC021205.2-201ENST00000480069 347 ntBASIC3.35□□□□□ -1.87
BRF2Q9HAW0 AC079382.1-201ENST00000493346 557 ntBASIC3.35□□□□□ -1.87
BRF2Q9HAW0 AC107401.1-201ENST00000503426 685 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms