Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC084024.2-201ENST00000503480 791 ntBASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 AC048346.1-201ENST00000510247 144 ntBASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 SCARNA11.3-201ENST00000517276 130 ntBASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 AC093519.1-201ENST00000566109 298 ntBASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 MIR4658-201ENST00000584344 65 ntBASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 AC133794.1-201ENST00000602731 914 ntBASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 AL031176.1-201ENST00000604554 466 ntBASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 AC025594.3-201ENST00000613068 790 ntBASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 AL031601.2-202ENST00000622650 282 ntBASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 AC073308.1-201ENST00000623696 305 ntBASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 OR5H6-203ENST00000642105 978 ntBASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.31□□□□□ -2.04
UPF3BQ9BZI7 AL049641.1-201ENST00000441055 1948 ntBASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 AL109809.4-201ENST00000603520 2185 ntBASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 AC009902.3-201ENST00000606235 2172 ntBASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 Y_RNA.122-201ENST00000363331 96 ntBASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 SNORD116-23-201ENST00000384645 92 ntBASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 EIF4EP3-201ENST00000498782 656 ntBASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 RNU6-928P-201ENST00000516876 104 ntBASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 HMGB1P1-201ENST00000522557 636 ntBASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 GNAI2P1-201ENST00000541815 315 ntBASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 AL138976.2-201ENST00000563989 694 ntBASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 MIR3935-201ENST00000583472 104 ntBASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 MIR4448-201ENST00000584360 86 ntBASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 AL022067.1-201ENST00000602426 454 ntBASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 AC090772.4-201ENST00000623599 362 ntBASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 ZNF355P-201ENST00000427301 3216 ntBASIC2.3□□□□□ -2.04
UPF3BQ9BZI7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 SNORA25.9-201ENST00000365087 128 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 RNU6-883P-201ENST00000384597 107 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 MIR135A2-201ENST00000384854 100 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 FCF1P2-201ENST00000415284 583 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 CR848007.2-201ENST00000424918 787 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 TAF9P1-201ENST00000445421 515 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 MTCO1P48-201ENST00000448024 1096 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 TAF9P2-201ENST00000454958 515 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 CDC42P1-201ENST00000456658 548 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 AC078857.1-201ENST00000469870 667 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 RPS27P21-201ENST00000486977 252 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 AC113420.1-201ENST00000507903 571 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 MRPS36P2-201ENST00000512569 299 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 RNA5SP182-201ENST00000516064 82 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 RNA5SP364-201ENST00000516938 78 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 BTF3P12-201ENST00000519620 469 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 FAM92A1P1-201ENST00000528023 890 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 AC068135.2-201ENST00000569293 1028 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 MIR6845-201ENST00000613182 61 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 HMGB1P24-202ENST00000615653 685 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 AC010329.5-201ENST00000623497 2174 ntBASIC2.29□□□□□ -2.04
UPF3BQ9BZI7 KPNA2P1-201ENST00000458289 1591 ntBASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 AC004520.1-201ENST00000608362 1413 ntBASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 SNORA38-201ENST00000363946 132 ntBASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 CYCSP49-201ENST00000420810 319 ntBASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 AC099548.1-201ENST00000421443 426 ntBASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.28□□□□□ -2.04
UPF3BQ9BZI7 RPL26P6-201ENST00000440913 438 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms