Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AL024474.1-201ENST00000404655 591 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.17□□□□□ -1.74
SALL3Q9BXA9 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.17□□□□□ -1.74
SALL3Q9BXA9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.17□□□□□ -1.74
SALL3Q9BXA9 RPS15AP40-201ENST00000419621 391 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 RPL23AP82-202ENST00000427528 469 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 AC137499.1-201ENST00000427602 88 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 SRIP2-201ENST00000428470 166 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 GPR143P-201ENST00000434155 205 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 YWHAZP8-201ENST00000436935 731 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 AC079781.2-201ENST00000446424 169 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.17□□□□□ -1.74
SALL3Q9BXA9 AL356010.1-201ENST00000456364 102 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 SNORD108-201ENST00000459332 71 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 CENPBD1P1-201ENST00000464061 469 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.17□□□□□ -1.74
SALL3Q9BXA9 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.17□□□□□ -1.74
SALL3Q9BXA9 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.17□□□□□ -1.74
SALL3Q9BXA9 AC093663.1-201ENST00000497190 394 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.17□□□□□ -1.74
SALL3Q9BXA9 RNA5SP401-201ENST00000515920 127 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 AC107934.1-201ENST00000522215 217 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 AC022616.3-201ENST00000523940 148 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.17□□□□□ -1.74
SALL3Q9BXA9 SETP2-201ENST00000553886 926 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 AL356432.3-201ENST00000568952 465 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 AP001429.1-201ENST00000602568 530 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 AC113139.1-201ENST00000605049 239 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 HSPE1P14-201ENST00000605812 302 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 AC110801.1-201ENST00000623590 212 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.17□□□□□ -1.74
SALL3Q9BXA9 CYP3A51P-201ENST00000633513 256 ntBASIC4.17□□□□□ -1.74
SALL3Q9BXA9 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
SALL3Q9BXA9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.17□□□□□ -1.74
SALL3Q9BXA9 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 PNPT1P2-201ENST00000456768 2050 ntBASIC4.16□□□□□ -1.74
SALL3Q9BXA9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.16□□□□□ -1.74
SALL3Q9BXA9 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 RPL7P26-201ENST00000333817 754 ntBASIC4.16□□□□□ -1.74
SALL3Q9BXA9 RNU1-70P-201ENST00000362618 164 ntBASIC4.16□□□□□ -1.74
SALL3Q9BXA9 RNU6-1068P-201ENST00000410958 103 ntBASIC4.16□□□□□ -1.74
SALL3Q9BXA9 RN7SKP140-201ENST00000411196 284 ntBASIC4.16□□□□□ -1.74
SALL3Q9BXA9 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 AC019097.1-201ENST00000424783 735 ntBASIC4.16□□□□□ -1.74
SALL3Q9BXA9 AC119618.1-201ENST00000434191 222 ntBASIC4.16□□□□□ -1.74
SALL3Q9BXA9 AC073063.1-201ENST00000434352 607 ntBASIC4.16□□□□□ -1.74
SALL3Q9BXA9 BX679664.1-201ENST00000434429 253 ntBASIC4.16□□□□□ -1.74
SALL3Q9BXA9 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 DDX3P2-201ENST00000446138 111 ntBASIC4.16□□□□□ -1.74
SALL3Q9BXA9 RPL7P12-201ENST00000446719 750 ntBASIC4.16□□□□□ -1.74
SALL3Q9BXA9 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 RPL38P4-201ENST00000502376 214 ntBASIC4.16□□□□□ -1.74
SALL3Q9BXA9 TMEM248P1-201ENST00000510579 951 ntBASIC4.16□□□□□ -1.74
SALL3Q9BXA9 SCARNA20.6-201ENST00000517251 106 ntBASIC4.16□□□□□ -1.74
SALL3Q9BXA9 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 OR4T1P-201ENST00000554933 911 ntBASIC4.16□□□□□ -1.74
SALL3Q9BXA9 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 AC004853.1-201ENST00000604902 698 ntBASIC4.16□□□□□ -1.74
SALL3Q9BXA9 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 AC069200.1-201ENST00000609511 323 ntBASIC4.16□□□□□ -1.74
SALL3Q9BXA9 AL355472.4-201ENST00000610233 626 ntBASIC4.16□□□□□ -1.74
SALL3Q9BXA9 AC093838.1-201ENST00000613014 469 ntBASIC4.16□□□□□ -1.74
SALL3Q9BXA9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.16□□□□□ -1.74
SALL3Q9BXA9 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
SALL3Q9BXA9 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SALL3Q9BXA9 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SALL3Q9BXA9 AF117829.1-206ENST00000621883 3802 ntBASIC4.15□□□□□ -1.74
SALL3Q9BXA9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.15□□□□□ -1.74
SALL3Q9BXA9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SALL3Q9BXA9 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SALL3Q9BXA9 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SALL3Q9BXA9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.15□□□□□ -1.75
SALL3Q9BXA9 AC007496.3-201ENST00000624987 3443 ntBASIC4.15□□□□□ -1.75
SALL3Q9BXA9 SAGE4P-201ENST00000442271 3381 ntBASIC4.15□□□□□ -1.75
SALL3Q9BXA9 RNU6-28P-201ENST00000362378 107 ntBASIC4.15□□□□□ -1.75
SALL3Q9BXA9 RNU6-223P-201ENST00000362830 107 ntBASIC4.15□□□□□ -1.75
SALL3Q9BXA9 AL122016.1-201ENST00000403365 367 ntBASIC4.15□□□□□ -1.75
SALL3Q9BXA9 RNA5SP229-201ENST00000410809 99 ntBASIC4.15□□□□□ -1.75
SALL3Q9BXA9 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.15□□□□□ -1.75
SALL3Q9BXA9 AC092832.1-201ENST00000422934 400 ntBASIC4.15□□□□□ -1.75
SALL3Q9BXA9 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.15□□□□□ -1.75
SALL3Q9BXA9 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.15□□□□□ -1.75
SALL3Q9BXA9 HMGN2P31-201ENST00000432430 273 ntBASIC4.15□□□□□ -1.75
SALL3Q9BXA9 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.15□□□□□ -1.75
SALL3Q9BXA9 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.15□□□□□ -1.75
SALL3Q9BXA9 RN7SKP60-201ENST00000516985 239 ntBASIC4.15□□□□□ -1.75
SALL3Q9BXA9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.15□□□□□ -1.75
SALL3Q9BXA9 HPRT1P3-201ENST00000539521 576 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms