Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC015871.5-202ENST00000623252 701 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 TLK1P1-201ENST00000456760 2440 ntBASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRAIPQ9BWF2 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 AL133243.3-201ENST00000617415 3004 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 RPL32P3-201ENST00000359025 275 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 RNU6-884P-201ENST00000363889 107 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 RNU6-593P-201ENST00000364716 112 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 RNU6-166P-201ENST00000384371 107 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 Y_RNA.482-201ENST00000384377 111 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 RNU6-601P-201ENST00000384540 107 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 MIR3074-201ENST00000384885 81 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 RNA5SP397-201ENST00000391323 118 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 RN7SKP106-201ENST00000410832 272 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 RPL36AP10-201ENST00000421785 322 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 SAR1AP4-201ENST00000429225 591 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 RPS17P8-201ENST00000434525 335 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 SNORA71B-202ENST00000439232 272 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 MTATP6P7-201ENST00000453315 681 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 AC022795.1-201ENST00000473808 480 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 RPL32P34-201ENST00000486380 400 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 RNU6-928P-201ENST00000516876 104 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 RN7SKP92-201ENST00000517266 244 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 AC133555.2-201ENST00000550213 292 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 NACAP3-201ENST00000552100 481 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 MIR5690-201ENST00000583739 73 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 AL133215.3-201ENST00000609801 448 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 MIR6128-201ENST00000615528 109 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 ZNF137P-201ENST00000456718 1920 ntBASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TRAIPQ9BWF2 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
TRAIPQ9BWF2 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 AL590240.1-201ENST00000334118 313 ntBASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 Y_RNA.315-201ENST00000365117 102 ntBASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 AL445529.1-201ENST00000398713 389 ntBASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 AL096701.2-201ENST00000416920 238 ntBASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 snoU13.1-201ENST00000459157 104 ntBASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 IMMP1LP2-201ENST00000552954 492 ntBASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 AC105129.1-201ENST00000560250 297 ntBASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 AL160413.1-201ENST00000622780 310 ntBASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRAIPQ9BWF2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNA5SP295-201ENST00000362655 121 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNU6-37P-201ENST00000362692 107 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNU6-11P-201ENST00000364234 107 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNU6-7-201ENST00000364784 107 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNU6-8-201ENST00000365467 107 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNU6-1329P-201ENST00000365664 107 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 UBBP2-201ENST00000376781 231 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNU6-25P-201ENST00000383873 107 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNU6-1-201ENST00000383898 107 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNU1-73P-201ENST00000383971 164 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNU6-48P-201ENST00000384161 107 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNU6-36P-201ENST00000384172 107 ntBASIC5.2□□□□□ -1.58
TRAIPQ9BWF2 RNU6-4P-201ENST00000384205 107 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms