Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL357552.1-201ENST00000445254 415 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.8□□□□□ -1.96
SSX3Q99909 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.8□□□□□ -1.96
SSX3Q99909 RN7SL594P-201ENST00000470590 287 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 RPL31P41-201ENST00000477967 372 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 RPL23AP70-201ENST00000483361 460 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 AC109486.1-201ENST00000486833 374 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 SUMO2P6-201ENST00000505273 288 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 SEM1P1-201ENST00000506694 209 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 MRPS36P2-201ENST00000512569 299 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.8□□□□□ -1.96
SSX3Q99909 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.8□□□□□ -1.96
SSX3Q99909 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.8□□□□□ -1.96
SSX3Q99909 ATP5F1P5-201ENST00000526403 760 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 AC034105.3-201ENST00000565294 442 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 AL355877.2-201ENST00000603670 358 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 AL359999.1-201ENST00000604513 294 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 AC012468.1-201ENST00000604888 430 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 AC007179.3-201ENST00000604976 235 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 AC019159.1-201ENST00000605094 187 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.8□□□□□ -1.96
SSX3Q99909 AC104010.1-201ENST00000616889 150 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 AC068057.2-201ENST00000624047 895 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 MTND1P37-201ENST00000636562 264 ntBASIC2.8□□□□□ -1.96
SSX3Q99909 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.8□□□□□ -1.96
SSX3Q99909 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SSX3Q99909 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.8□□□□□ -1.96
SSX3Q99909 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SSX3Q99909 ZNF519P1-201ENST00000449011 1626 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.79□□□□□ -1.96
SSX3Q99909 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SSX3Q99909 ZNF833P-201ENST00000424938 1494 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SSX3Q99909 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SSX3Q99909 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
SSX3Q99909 RNU6-1284P-201ENST00000363701 100 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 RNVU1-14-201ENST00000384770 164 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SSX3Q99909 FCF1P10-201ENST00000407590 479 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 SNORA11.1-201ENST00000408133 129 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 RNU2-33P-201ENST00000410344 192 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 Y_RNA.608-201ENST00000410647 95 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 AC007899.1-201ENST00000412776 775 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.79□□□□□ -1.96
SSX3Q99909 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.79□□□□□ -1.96
SSX3Q99909 AC006366.1-201ENST00000422002 759 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.79□□□□□ -1.96
SSX3Q99909 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.79□□□□□ -1.96
SSX3Q99909 ZNF863P-201ENST00000426746 417 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.79□□□□□ -1.96
SSX3Q99909 MTATP6P17-201ENST00000431030 672 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 GTF2IP20-201ENST00000431663 360 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 AC005019.1-201ENST00000436455 431 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 MTND1P26-201ENST00000440488 538 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 CYCSP32-201ENST00000440548 321 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 UBE2D3P4-201ENST00000441973 436 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 MTATP6P30-201ENST00000443540 664 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.79□□□□□ -1.96
SSX3Q99909 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.79□□□□□ -1.96
SSX3Q99909 RPS15AP27-201ENST00000449183 343 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 USP9YP12-201ENST00000450481 570 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 AL358832.1-201ENST00000497800 389 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 AC098799.2-201ENST00000509466 868 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.79□□□□□ -1.96
SSX3Q99909 SNORA70.19-201ENST00000516717 90 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.79□□□□□ -1.96
SSX3Q99909 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.79□□□□□ -1.96
SSX3Q99909 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.79□□□□□ -1.96
SSX3Q99909 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.79□□□□□ -1.96
SSX3Q99909 AL391261.3-201ENST00000557194 520 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.79□□□□□ -1.96
SSX3Q99909 HMGN2P15-201ENST00000585707 270 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.79□□□□□ -1.96
SSX3Q99909 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.79□□□□□ -1.96
SSX3Q99909 AL031775.1-201ENST00000607014 887 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 AC096577.2-201ENST00000611455 153 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 AC078883.4-201ENST00000623218 367 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 AP003399.1-201ENST00000637534 361 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 AC108206.1-201ENST00000570186 4159 ntBASIC2.79□□□□□ -1.96
SSX3Q99909 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SSX3Q99909 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.78□□□□□ -1.96
SSX3Q99909 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SSX3Q99909 AC092104.1-201ENST00000497346 1441 ntBASIC2.78□□□□□ -1.96
SSX3Q99909 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SSX3Q99909 FTLP6-201ENST00000355274 422 ntBASIC2.78□□□□□ -1.96
SSX3Q99909 RNY4P16-201ENST00000364768 94 ntBASIC2.78□□□□□ -1.96
SSX3Q99909 RNU6-217P-201ENST00000384164 104 ntBASIC2.78□□□□□ -1.96
SSX3Q99909 RNU6-140P-201ENST00000384566 108 ntBASIC2.78□□□□□ -1.96
SSX3Q99909 RPL21P3-201ENST00000395517 478 ntBASIC2.78□□□□□ -1.96
SSX3Q99909 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.78□□□□□ -1.96
SSX3Q99909 FCF1P1-201ENST00000432690 571 ntBASIC2.78□□□□□ -1.96
SSX3Q99909 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.78□□□□□ -1.96
SSX3Q99909 COX6CP12-201ENST00000446748 202 ntBASIC2.78□□□□□ -1.96
SSX3Q99909 SSXP1-201ENST00000453640 473 ntBASIC2.78□□□□□ -1.96
SSX3Q99909 RPL12P25-201ENST00000455592 494 ntBASIC2.78□□□□□ -1.96
SSX3Q99909 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.78□□□□□ -1.96
SSX3Q99909 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.78□□□□□ -1.96
SSX3Q99909 BET1P1-201ENST00000482276 359 ntBASIC2.78□□□□□ -1.96
SSX3Q99909 AL160314.1-201ENST00000490836 438 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms