Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RNA5SP139-201ENST00000364340 117 ntBASIC1.9□□□□□ -2.11
IFT140Q96RY7 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.9□□□□□ -2.11
IFT140Q96RY7 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.9□□□□□ -2.11
IFT140Q96RY7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.9□□□□□ -2.11
IFT140Q96RY7 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.9□□□□□ -2.11
IFT140Q96RY7 RPS15AP34-201ENST00000487776 387 ntBASIC1.9□□□□□ -2.11
IFT140Q96RY7 AC025768.1-201ENST00000510057 267 ntBASIC1.9□□□□□ -2.11
IFT140Q96RY7 AC087854.1-201ENST00000519706 414 ntBASIC1.9□□□□□ -2.11
IFT140Q96RY7 AC083923.1-201ENST00000523708 376 ntBASIC1.9□□□□□ -2.11
IFT140Q96RY7 AP003717.3-201ENST00000544832 1180 ntBASIC1.9□□□□□ -2.11
IFT140Q96RY7 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
IFT140Q96RY7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
IFT140Q96RY7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
IFT140Q96RY7 RNU6-882P-201ENST00000391025 103 ntBASIC1.89□□□□□ -2.11
IFT140Q96RY7 SNORA46.1-201ENST00000391069 153 ntBASIC1.89□□□□□ -2.11
IFT140Q96RY7 RN7SKP51-201ENST00000410781 304 ntBASIC1.89□□□□□ -2.11
IFT140Q96RY7 RNA5SP498-201ENST00000411342 120 ntBASIC1.89□□□□□ -2.11
IFT140Q96RY7 ZNF90P2-204ENST00000419323 1075 ntBASIC1.89□□□□□ -2.11
IFT140Q96RY7 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.89□□□□□ -2.11
IFT140Q96RY7 AC010301.1-201ENST00000473936 355 ntBASIC1.89□□□□□ -2.11
IFT140Q96RY7 AC114801.2-201ENST00000503825 781 ntBASIC1.89□□□□□ -2.11
IFT140Q96RY7 RNU6-319P-201ENST00000516025 108 ntBASIC1.89□□□□□ -2.11
IFT140Q96RY7 AC025918.2-201ENST00000558683 763 ntBASIC1.89□□□□□ -2.11
IFT140Q96RY7 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.89□□□□□ -2.11
IFT140Q96RY7 MTND4LP24-201ENST00000572277 291 ntBASIC1.89□□□□□ -2.11
IFT140Q96RY7 AC090897.2-201ENST00000581715 130 ntBASIC1.89□□□□□ -2.11
IFT140Q96RY7 MIR4295-201ENST00000585286 85 ntBASIC1.89□□□□□ -2.11
IFT140Q96RY7 MIR6864-201ENST00000617935 70 ntBASIC1.89□□□□□ -2.11
IFT140Q96RY7 FAM157B-203ENST00000639350 358 ntBASIC1.89□□□□□ -2.11
IFT140Q96RY7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.89□□□□□ -2.11
IFT140Q96RY7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
IFT140Q96RY7 AC111188.2-201ENST00000529697 1387 ntBASIC1.89□□□□□ -2.11
IFT140Q96RY7 SGO1P2-201ENST00000429458 1589 ntBASIC1.89□□□□□ -2.11
IFT140Q96RY7 RPS3AP44-201ENST00000425466 790 ntBASIC1.88□□□□□ -2.11
IFT140Q96RY7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
IFT140Q96RY7 GPM6BP3-201ENST00000442797 145 ntBASIC1.88□□□□□ -2.11
IFT140Q96RY7 AL035407.2-201ENST00000454090 378 ntBASIC1.88□□□□□ -2.11
IFT140Q96RY7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.88□□□□□ -2.11
IFT140Q96RY7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.88□□□□□ -2.11
IFT140Q96RY7 AL360085.1-201ENST00000604713 532 ntBASIC1.88□□□□□ -2.11
IFT140Q96RY7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.88□□□□□ -2.11
IFT140Q96RY7 MTND5P25-201ENST00000430499 799 ntBASIC1.88□□□□□ -2.11
IFT140Q96RY7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.88□□□□□ -2.11
IFT140Q96RY7 RABEPKP1-201ENST00000440529 1026 ntBASIC1.88□□□□□ -2.11
IFT140Q96RY7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
IFT140Q96RY7 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.88□□□□□ -2.11
IFT140Q96RY7 AC022690.1-201ENST00000526681 550 ntBASIC1.88□□□□□ -2.11
IFT140Q96RY7 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.88□□□□□ -2.11
IFT140Q96RY7 VN1R107P-201ENST00000601784 209 ntBASIC1.88□□□□□ -2.11
IFT140Q96RY7 AL162373.1-201ENST00000620433 407 ntBASIC1.88□□□□□ -2.11
IFT140Q96RY7 AP003072.5-201ENST00000623872 773 ntBASIC1.88□□□□□ -2.11
IFT140Q96RY7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.87□□□□□ -2.11
IFT140Q96RY7 MTND4P27-201ENST00000450813 1354 ntBASIC1.87□□□□□ -2.11
IFT140Q96RY7 RNU6-629P-201ENST00000384061 103 ntBASIC1.87□□□□□ -2.11
IFT140Q96RY7 MIR216A-201ENST00000385063 110 ntBASIC1.87□□□□□ -2.11
IFT140Q96RY7 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.87□□□□□ -2.11
IFT140Q96RY7 RPL31P63-201ENST00000422565 375 ntBASIC1.87□□□□□ -2.11
IFT140Q96RY7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.87□□□□□ -2.11
IFT140Q96RY7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.87□□□□□ -2.11
IFT140Q96RY7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.87□□□□□ -2.11
IFT140Q96RY7 TPRKBP1-201ENST00000456243 481 ntBASIC1.87□□□□□ -2.11
IFT140Q96RY7 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.87□□□□□ -2.11
IFT140Q96RY7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.87□□□□□ -2.11
IFT140Q96RY7 AP004371.1-201ENST00000525240 214 ntBASIC1.87□□□□□ -2.11
IFT140Q96RY7 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC1.87□□□□□ -2.11
IFT140Q96RY7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.87□□□□□ -2.11
IFT140Q96RY7 AC106791.2-201ENST00000604680 391 ntBASIC1.87□□□□□ -2.11
IFT140Q96RY7 AC090525.3-201ENST00000605601 189 ntBASIC1.87□□□□□ -2.11
IFT140Q96RY7 AC091932.3-201ENST00000624223 323 ntBASIC1.87□□□□□ -2.11
IFT140Q96RY7 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.87□□□□□ -2.11
IFT140Q96RY7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
IFT140Q96RY7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
IFT140Q96RY7 Y_RNA.178-201ENST00000363832 102 ntBASIC1.86□□□□□ -2.11
IFT140Q96RY7 HMGN1P33-201ENST00000432945 451 ntBASIC1.86□□□□□ -2.11
IFT140Q96RY7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.86□□□□□ -2.11
IFT140Q96RY7 THAP5P1-201ENST00000439089 262 ntBASIC1.86□□□□□ -2.11
IFT140Q96RY7 FO393415.2-201ENST00000480085 343 ntBASIC1.86□□□□□ -2.11
IFT140Q96RY7 AC093801.2-201ENST00000503966 1050 ntBASIC1.86□□□□□ -2.11
IFT140Q96RY7 MTND2P26-201ENST00000528255 1029 ntBASIC1.86□□□□□ -2.11
IFT140Q96RY7 CYP3A137P-201ENST00000562436 69 ntBASIC1.86□□□□□ -2.11
IFT140Q96RY7 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.86□□□□□ -2.11
IFT140Q96RY7 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.86□□□□□ -2.11
IFT140Q96RY7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
IFT140Q96RY7 AC010889.1-201ENST00000566193 2666 ntBASIC1.85□□□□□ -2.11
IFT140Q96RY7 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
IFT140Q96RY7 CYCSP48-201ENST00000417124 323 ntBASIC1.85□□□□□ -2.11
IFT140Q96RY7 HMGB1P22-201ENST00000505315 124 ntBASIC1.85□□□□□ -2.11
IFT140Q96RY7 RNA5SP384-201ENST00000516615 116 ntBASIC1.85□□□□□ -2.11
IFT140Q96RY7 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.85□□□□□ -2.11
IFT140Q96RY7 CIR1P1-201ENST00000524055 1133 ntBASIC1.85□□□□□ -2.11
IFT140Q96RY7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.85□□□□□ -2.11
IFT140Q96RY7 AC112191.3-201ENST00000604371 277 ntBASIC1.85□□□□□ -2.11
IFT140Q96RY7 AC011472.4-201ENST00000615848 491 ntBASIC1.85□□□□□ -2.11
IFT140Q96RY7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.85□□□□□ -2.11
IFT140Q96RY7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.85□□□□□ -2.11
IFT140Q96RY7 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.84□□□□□ -2.11
IFT140Q96RY7 RNU6-37P-201ENST00000362692 107 ntBASIC1.84□□□□□ -2.11
IFT140Q96RY7 RNU6-11P-201ENST00000364234 107 ntBASIC1.84□□□□□ -2.11
IFT140Q96RY7 RNU6-1251P-201ENST00000364502 107 ntBASIC1.84□□□□□ -2.11
IFT140Q96RY7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms