Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NR1H4Q96RI1 SNORA51.4-201ENST00000364993 124 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 GSTA9P-201ENST00000406231 611 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 RNU2-66P-201ENST00000410650 161 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 RNU4-6P-201ENST00000410804 122 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.33□□□□□ -1.88
NR1H4Q96RI1 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.33□□□□□ -1.88
NR1H4Q96RI1 AC069157.1-201ENST00000421749 137 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.33□□□□□ -1.88
NR1H4Q96RI1 AL691449.1-201ENST00000426570 421 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.33□□□□□ -1.88
NR1H4Q96RI1 AC073464.1-201ENST00000429823 534 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.33□□□□□ -1.88
NR1H4Q96RI1 GPM6BP2-201ENST00000432046 144 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 GPM6BP1-201ENST00000446387 144 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.33□□□□□ -1.88
NR1H4Q96RI1 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.33□□□□□ -1.88
NR1H4Q96RI1 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.33□□□□□ -1.88
NR1H4Q96RI1 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.33□□□□□ -1.88
NR1H4Q96RI1 AC126389.1-201ENST00000477436 290 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 AC079382.1-201ENST00000493346 557 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 AC105252.1-201ENST00000503089 286 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NR1H4Q96RI1 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NR1H4Q96RI1 Y_RNA.655-201ENST00000515919 96 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.33□□□□□ -1.88
NR1H4Q96RI1 AP000867.2-201ENST00000532468 320 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.33□□□□□ -1.88
NR1H4Q96RI1 SUB1P2-201ENST00000556401 297 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 AC009063.1-201ENST00000563342 702 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 RN7SL600P-201ENST00000581811 299 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 MIR3939-201ENST00000582614 106 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 BNIP3P9-201ENST00000603714 553 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 AL161798.1-201ENST00000604630 131 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 Z84480.1-201ENST00000605131 311 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 AC136475.10-201ENST00000620253 385 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 AC073534.2-201ENST00000620377 381 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.33□□□□□ -1.88
NR1H4Q96RI1 MTND5P42-201ENST00000637720 498 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 API5P2-201ENST00000397055 1498 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NR1H4Q96RI1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NR1H4Q96RI1 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 MTND5P19-201ENST00000424872 1794 ntBASIC3.33□□□□□ -1.88
NR1H4Q96RI1 AC233263.6-201ENST00000631132 1963 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AC007656.2-201ENST00000624902 4547 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 RNU6-179P-201ENST00000363350 107 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 RNU1-32P-201ENST00000363937 159 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 RNU6-512P-201ENST00000364438 103 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 RNU4-75P-201ENST00000364621 146 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 RNU6-259P-201ENST00000383999 107 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 RNU6-217P-201ENST00000384164 104 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 Y_RNA.517-201ENST00000384551 106 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 RPL5P18-201ENST00000406671 891 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AC010975.2-201ENST00000427781 588 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 RPL23AP30-201ENST00000432419 501 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AL591212.2-201ENST00000433923 257 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 TBCAP1-201ENST00000436520 327 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 HIGD1AP11-201ENST00000438361 280 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 RPL23AP67-201ENST00000465341 474 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 RPL39P36-201ENST00000490784 156 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AC116562.3-201ENST00000506136 177 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 SNORD59.2-201ENST00000516873 68 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 CDH12P4-201ENST00000517835 295 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 CDH12P3-201ENST00000517935 295 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 CDH12P1-201ENST00000518435 295 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AC107934.2-201ENST00000518653 310 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 DUXAP2-201ENST00000519198 589 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 RAB9BP1-201ENST00000519581 626 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AP003730.1-201ENST00000524605 285 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AC068587.5-201ENST00000528506 175 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 OR4R1P-201ENST00000529879 463 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AL136363.2-201ENST00000604173 851 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AC136601.2-201ENST00000604356 474 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AC015540.1-201ENST00000615828 501 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AL445567.2-201ENST00000618935 498 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AC009161.2-201ENST00000624626 138 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AL392088.2-201ENST00000637607 285 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms