Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SNX18Q96RF0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.69□□□□□ -1.82
SNX18Q96RF0 AL139276.1-201ENST00000311910 1001 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 Y_RNA.58-201ENST00000362807 102 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 Y_RNA.154-201ENST00000363624 102 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 RNA5SP515-201ENST00000364570 118 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 RNY3P1-201ENST00000365085 102 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 SNORD115-7-201ENST00000365306 82 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 RNA5SP366-201ENST00000365454 123 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 RNY3-201ENST00000365484 102 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 Y_RNA.373-201ENST00000365600 103 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 Y_RNA.490-201ENST00000384413 102 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 Y_RNA.576-201ENST00000384781 102 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 SNORA57.1-201ENST00000391227 145 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 AC110754.1-201ENST00000399740 601 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 RPS20P15-201ENST00000412792 311 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 MTND3P8-201ENST00000412909 339 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 OR6C66P-201ENST00000414917 930 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 AL645937.1-202ENST00000421799 937 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 RPL36AP6-201ENST00000435770 321 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 USP9YP7-201ENST00000436723 430 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 GAPDHP27-201ENST00000447427 1020 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.69□□□□□ -1.82
SNX18Q96RF0 USP9YP32-201ENST00000452432 430 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.69□□□□□ -1.82
SNX18Q96RF0 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.69□□□□□ -1.82
SNX18Q96RF0 AC091167.1-201ENST00000492017 396 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 RPL31P61-201ENST00000496160 376 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.69□□□□□ -1.82
SNX18Q96RF0 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.69□□□□□ -1.82
SNX18Q96RF0 AC099522.1-202ENST00000514718 367 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 Y_RNA.665-201ENST00000516177 98 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 RNU6-1038P-201ENST00000516516 104 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.69□□□□□ -1.82
SNX18Q96RF0 AC011611.1-201ENST00000552179 197 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.69□□□□□ -1.82
SNX18Q96RF0 PSMA3P-201ENST00000555485 635 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 TVP23BP1-201ENST00000557500 617 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.69□□□□□ -1.82
SNX18Q96RF0 AC005668.1-201ENST00000571142 476 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 MIR5583-1-201ENST00000580941 59 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 MIR4742-201ENST00000581069 85 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.69□□□□□ -1.82
SNX18Q96RF0 AC016727.1-205ENST00000605437 569 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 uc_338.5-201ENST00000611839 155 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 AC004696.1-201ENST00000614345 607 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 AC092628.2-201ENST00000622492 339 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.69□□□□□ -1.82
SNX18Q96RF0 MIR3653-201ENST00000625572 110 ntBASIC3.69□□□□□ -1.82
SNX18Q96RF0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.69□□□□□ -1.82
SNX18Q96RF0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SNX18Q96RF0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SNX18Q96RF0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SNX18Q96RF0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX18Q96RF0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SNX18Q96RF0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX18Q96RF0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX18Q96RF0 API5P2-201ENST00000397055 1498 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 AP004289.2-201ENST00000444413 1457 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 RNU4-79P-201ENST00000362764 141 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 RNU1-132P-201ENST00000364300 164 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 RNU6-335P-201ENST00000364563 113 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 SNORD6-201ENST00000365444 73 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 RNU6-76P-201ENST00000384060 104 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 SOD2P1-201ENST00000396543 562 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.68□□□□□ -1.82
SNX18Q96RF0 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.68□□□□□ -1.82
SNX18Q96RF0 RPL7L1P10-201ENST00000427790 463 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 AC079780.1-201ENST00000428259 207 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.68□□□□□ -1.82
SNX18Q96RF0 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.68□□□□□ -1.82
SNX18Q96RF0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.68□□□□□ -1.82
SNX18Q96RF0 SNRPFP3-201ENST00000457792 225 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.68□□□□□ -1.82
SNX18Q96RF0 RNU7-180P-201ENST00000459240 63 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 VN1R105P-201ENST00000486595 910 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 AC104806.1-201ENST00000508720 308 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 AC108078.2-201ENST00000510750 236 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SNX18Q96RF0 RNU7-143P-201ENST00000516781 65 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 SNORA31.20-201ENST00000517111 133 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 RNU6-840P-201ENST00000517275 65 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 RPL7P20-201ENST00000520308 745 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.68□□□□□ -1.82
SNX18Q96RF0 HPRT1P3-201ENST00000539521 576 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.68□□□□□ -1.82
SNX18Q96RF0 OR4H12P-201ENST00000556269 907 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.68□□□□□ -1.82
SNX18Q96RF0 SNRPGP15-201ENST00000600149 222 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 VN1R85P-201ENST00000601587 426 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.68□□□□□ -1.82
SNX18Q96RF0 AL161729.3-201ENST00000603533 673 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 AC021646.1-201ENST00000605469 484 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 MTND1P37-201ENST00000636562 264 ntBASIC3.68□□□□□ -1.82
SNX18Q96RF0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SNX18Q96RF0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX18Q96RF0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX18Q96RF0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SNX18Q96RF0 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms