Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 OR4R1P-201ENST00000529879 463 ntBASIC0.93□□□□□ -2.26
CFAP54Q96N23 MIR6840-201ENST00000611937 71 ntBASIC0.93□□□□□ -2.26
CFAP54Q96N23 AC024595.1-201ENST00000623088 387 ntBASIC0.93□□□□□ -2.26
CFAP54Q96N23 MTND4P27-201ENST00000450813 1354 ntBASIC0.93□□□□□ -2.26
CFAP54Q96N23 AC073544.1-201ENST00000600110 1595 ntBASIC0.93□□□□□ -2.26
CFAP54Q96N23 RNU2-40P-201ENST00000410833 196 ntBASIC0.92□□□□□ -2.26
CFAP54Q96N23 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.92□□□□□ -2.26
CFAP54Q96N23 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.92□□□□□ -2.26
CFAP54Q96N23 FO393415.2-201ENST00000480085 343 ntBASIC0.92□□□□□ -2.26
CFAP54Q96N23 MTCO1P30-201ENST00000515244 580 ntBASIC0.92□□□□□ -2.26
CFAP54Q96N23 DPRXP5-201ENST00000604662 539 ntBASIC0.92□□□□□ -2.26
CFAP54Q96N23 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC0.92□□□□□ -2.26
CFAP54Q96N23 NUP35P2-201ENST00000416748 943 ntBASIC0.92□□□□□ -2.26
CFAP54Q96N23 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.92□□□□□ -2.26
CFAP54Q96N23 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.92□□□□□ -2.26
CFAP54Q96N23 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC0.92□□□□□ -2.26
CFAP54Q96N23 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC0.92□□□□□ -2.26
CFAP54Q96N23 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.92□□□□□ -2.26
CFAP54Q96N23 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
CFAP54Q96N23 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC0.92□□□□□ -2.26
CFAP54Q96N23 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
CFAP54Q96N23 RNA5SP167-201ENST00000365461 116 ntBASIC0.92□□□□□ -2.26
CFAP54Q96N23 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.92□□□□□ -2.26
CFAP54Q96N23 Z99497.1-201ENST00000421282 135 ntBASIC0.92□□□□□ -2.26
CFAP54Q96N23 NACAP2-201ENST00000318548 624 ntBASIC0.91□□□□□ -2.26
CFAP54Q96N23 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.91□□□□□ -2.26
CFAP54Q96N23 AC104308.1-201ENST00000454621 333 ntBASIC0.91□□□□□ -2.26
CFAP54Q96N23 ARPC3P2-201ENST00000457786 533 ntBASIC0.91□□□□□ -2.26
CFAP54Q96N23 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.91□□□□□ -2.26
CFAP54Q96N23 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
CFAP54Q96N23 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
CFAP54Q96N23 MIR513A1-201ENST00000385138 129 ntBASIC0.91□□□□□ -2.26
CFAP54Q96N23 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC0.91□□□□□ -2.26
CFAP54Q96N23 RPL26P9-201ENST00000457466 433 ntBASIC0.9□□□□□ -2.26
CFAP54Q96N23 BZW1P2-201ENST00000473537 826 ntBASIC0.9□□□□□ -2.26
CFAP54Q96N23 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC0.9□□□□□ -2.26
CFAP54Q96N23 AC023050.2-201ENST00000544968 387 ntBASIC0.9□□□□□ -2.26
CFAP54Q96N23 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.9□□□□□ -2.26
CFAP54Q96N23 AC015922.2-201ENST00000435593 184 ntBASIC0.9□□□□□ -2.27
CFAP54Q96N23 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CFAP54Q96N23 COX6CP18-201ENST00000448769 222 ntBASIC0.9□□□□□ -2.27
CFAP54Q96N23 AP001960.1-201ENST00000506494 658 ntBASIC0.9□□□□□ -2.27
CFAP54Q96N23 SNORA31.20-201ENST00000517111 133 ntBASIC0.9□□□□□ -2.27
CFAP54Q96N23 AC239860.2-201ENST00000525886 270 ntBASIC0.9□□□□□ -2.27
CFAP54Q96N23 uc_338.22-201ENST00000622722 187 ntBASIC0.9□□□□□ -2.27
CFAP54Q96N23 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.9□□□□□ -2.27
CFAP54Q96N23 MIR144-201ENST00000384886 86 ntBASIC0.9□□□□□ -2.27
CFAP54Q96N23 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.9□□□□□ -2.27
CFAP54Q96N23 PGBD4P3-201ENST00000440731 581 ntBASIC0.9□□□□□ -2.27
CFAP54Q96N23 RN7SKP179-201ENST00000516126 217 ntBASIC0.9□□□□□ -2.27
CFAP54Q96N23 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.9□□□□□ -2.27
CFAP54Q96N23 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.9□□□□□ -2.27
CFAP54Q96N23 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.9□□□□□ -2.27
CFAP54Q96N23 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC0.9□□□□□ -2.27
CFAP54Q96N23 MIR4278-201ENST00000636094 69 ntBASIC0.9□□□□□ -2.27
CFAP54Q96N23 Y_RNA.488-201ENST00000384403 102 ntBASIC0.89□□□□□ -2.27
CFAP54Q96N23 RNU6-997P-201ENST00000384725 107 ntBASIC0.89□□□□□ -2.27
CFAP54Q96N23 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
CFAP54Q96N23 MTND2P16-201ENST00000419987 799 ntBASIC0.89□□□□□ -2.27
CFAP54Q96N23 MRPS33P3-201ENST00000513456 322 ntBASIC0.89□□□□□ -2.27
CFAP54Q96N23 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.89□□□□□ -2.27
CFAP54Q96N23 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.89□□□□□ -2.27
CFAP54Q96N23 NOP56P3-201ENST00000549457 385 ntBASIC0.89□□□□□ -2.27
CFAP54Q96N23 SNORD114-21-201ENST00000606412 72 ntBASIC0.89□□□□□ -2.27
CFAP54Q96N23 AL161722.3-201ENST00000605789 2983 ntBASIC0.89□□□□□ -2.27
CFAP54Q96N23 RNU6-418P-201ENST00000384035 107 ntBASIC0.89□□□□□ -2.27
CFAP54Q96N23 MIR329-2-201ENST00000385029 84 ntBASIC0.89□□□□□ -2.27
CFAP54Q96N23 GPM6BP3-201ENST00000442797 145 ntBASIC0.89□□□□□ -2.27
CFAP54Q96N23 RPL30P12-201ENST00000474666 353 ntBASIC0.89□□□□□ -2.27
CFAP54Q96N23 FAM71BP1-201ENST00000604431 523 ntBASIC0.89□□□□□ -2.27
CFAP54Q96N23 OR4G3P-201ENST00000633500 913 ntBASIC0.89□□□□□ -2.27
CFAP54Q96N23 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
CFAP54Q96N23 RNU6-173P-201ENST00000364215 104 ntBASIC0.88□□□□□ -2.27
CFAP54Q96N23 MTCO1P43-201ENST00000431831 488 ntBASIC0.88□□□□□ -2.27
CFAP54Q96N23 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.88□□□□□ -2.27
CFAP54Q96N23 AC121161.1-201ENST00000510606 652 ntBASIC0.88□□□□□ -2.27
CFAP54Q96N23 AC112198.4-201ENST00000515450 351 ntBASIC0.88□□□□□ -2.27
CFAP54Q96N23 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.88□□□□□ -2.27
CFAP54Q96N23 MIR6835-201ENST00000621552 64 ntBASIC0.88□□□□□ -2.27
CFAP54Q96N23 SNORD56.5-201ENST00000364281 72 ntBASIC0.88□□□□□ -2.27
CFAP54Q96N23 ARF4P4-201ENST00000439608 520 ntBASIC0.88□□□□□ -2.27
CFAP54Q96N23 AL357134.1-201ENST00000445848 426 ntBASIC0.88□□□□□ -2.27
CFAP54Q96N23 RNA5SP285-201ENST00000516619 119 ntBASIC0.88□□□□□ -2.27
CFAP54Q96N23 AL391261.3-201ENST00000557194 520 ntBASIC0.88□□□□□ -2.27
CFAP54Q96N23 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CFAP54Q96N23 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
CFAP54Q96N23 RPS23P3-201ENST00000470993 430 ntBASIC0.87□□□□□ -2.27
CFAP54Q96N23 RNU2-44P-201ENST00000516795 194 ntBASIC0.87□□□□□ -2.27
CFAP54Q96N23 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.87□□□□□ -2.27
CFAP54Q96N23 AC125611.2-201ENST00000551907 647 ntBASIC0.87□□□□□ -2.27
CFAP54Q96N23 AC113368.1-201ENST00000603736 382 ntBASIC0.87□□□□□ -2.27
CFAP54Q96N23 FAM157A-202ENST00000615155 405 ntBASIC0.87□□□□□ -2.27
CFAP54Q96N23 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.87□□□□□ -2.27
CFAP54Q96N23 RNU1-62P-201ENST00000362599 164 ntBASIC0.87□□□□□ -2.27
CFAP54Q96N23 RNU1-23P-201ENST00000363361 144 ntBASIC0.87□□□□□ -2.27
CFAP54Q96N23 MIR1285-1-201ENST00000408593 84 ntBASIC0.87□□□□□ -2.27
CFAP54Q96N23 HMGB1P9-201ENST00000429856 646 ntBASIC0.87□□□□□ -2.27
CFAP54Q96N23 AC008379.1-201ENST00000463655 464 ntBASIC0.87□□□□□ -2.27
CFAP54Q96N23 AC104685.1-201ENST00000502445 371 ntBASIC0.87□□□□□ -2.27
CFAP54Q96N23 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms