Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
MS4A3Q96HJ5 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
MS4A3Q96HJ5 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 AC118273.1-201ENST00000525324 3006 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 RNA5SP65-201ENST00000363166 119 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 Y_RNA.265-201ENST00000364677 108 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 MIR759-201ENST00000390224 91 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 AC004866.1-201ENST00000411748 78 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 MYL6P5-201ENST00000412707 459 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 RPEP4-201ENST00000437636 602 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 AC125238.1-201ENST00000448842 249 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 PPIAP32-201ENST00000449940 472 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 RN7SL790P-201ENST00000474043 298 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 RN7SL70P-201ENST00000478322 302 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 SRIP1-201ENST00000489235 288 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 RNU6-1337P-201ENST00000516525 95 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 AC022790.1-201ENST00000522872 204 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 ASB8-207ENST00000536953 923 ntTSL 2 BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 AC053481.4-201ENST00000583164 216 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 AL020997.2-201ENST00000602607 184 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 TCL6_2.1-201ENST00000615162 119 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 MIR6134-201ENST00000617606 109 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 MIR6849-201ENST00000618543 69 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
MS4A3Q96HJ5 Z73965.1-201ENST00000623412 2297 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 RNY3P2-201ENST00000362918 102 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 RNA5SP382-201ENST00000363355 112 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 U3.8-201ENST00000363675 217 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 SNORA70.3-201ENST00000365075 132 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 AC092634.1-201ENST00000366505 199 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 SNORD116-13-201ENST00000384408 92 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 SNORA70E-201ENST00000384492 135 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 RNA5SP474-201ENST00000391234 90 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 RPL27AP8-201ENST00000424277 446 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 RPL23AP82-202ENST00000427528 469 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 AL353689.1-201ENST00000438895 199 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 AC000111.2-201ENST00000448200 210 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 RPL23AP7-203ENST00000449021 469 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 RPL10P17-201ENST00000453852 316 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 CENPBD1P1-201ENST00000464061 469 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 AC009567.2-201ENST00000502989 349 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 SNRPCP6-201ENST00000528310 210 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 AC005972.2-201ENST00000604690 348 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 AC120057.5-201ENST00000623840 154 ntBASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
MS4A3Q96HJ5 ZNF137P-201ENST00000456718 1920 ntBASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 AL159152.1-201ENST00000635019 2587 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms