Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 FGF7P4-201ENST00000509595 295 ntBASIC4.12□□□□□ -1.75
CCHCR1Q8TD31 RNU2-58P-201ENST00000516403 183 ntBASIC4.12□□□□□ -1.75
CCHCR1Q8TD31 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.12□□□□□ -1.75
CCHCR1Q8TD31 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCHCR1Q8TD31 OR5B10P-201ENST00000532869 642 ntBASIC4.12□□□□□ -1.75
CCHCR1Q8TD31 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.12□□□□□ -1.75
CCHCR1Q8TD31 OR4H12P-201ENST00000556269 907 ntBASIC4.12□□□□□ -1.75
CCHCR1Q8TD31 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.12□□□□□ -1.75
CCHCR1Q8TD31 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.12□□□□□ -1.75
CCHCR1Q8TD31 MIR4697-201ENST00000582977 78 ntBASIC4.12□□□□□ -1.75
CCHCR1Q8TD31 AL022099.1-201ENST00000604551 712 ntBASIC4.12□□□□□ -1.75
CCHCR1Q8TD31 AC087045.1-201ENST00000605856 382 ntBASIC4.12□□□□□ -1.75
CCHCR1Q8TD31 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCHCR1Q8TD31 AC112484.5-201ENST00000624189 228 ntBASIC4.12□□□□□ -1.75
CCHCR1Q8TD31 MIR492-201ENST00000638676 116 ntBASIC4.12□□□□□ -1.75
CCHCR1Q8TD31 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCHCR1Q8TD31 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CCHCR1Q8TD31 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCHCR1Q8TD31 AC009812.4-201ENST00000569134 1805 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 RNU6-1074P-201ENST00000383995 104 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 Y_RNA.509-201ENST00000384506 99 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 SNORD37.1-201ENST00000390968 65 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 NDUFS5P1-201ENST00000405668 289 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 RN7SKP32-201ENST00000410167 303 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 AC009161.1-201ENST00000417306 376 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 AL645937.1-202ENST00000421799 937 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 RPL35AP12-201ENST00000425362 338 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 MTCO1P39-201ENST00000426148 480 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 MTATP6P4-201ENST00000427725 675 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 RPL7P12-201ENST00000446719 750 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 AL359073.1-201ENST00000448036 403 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 RPL23AP62-201ENST00000463396 453 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 AC110792.1-201ENST00000491826 472 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 AC108078.2-201ENST00000510750 236 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 MIR2116-201ENST00000517221 80 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 AC006270.2-201ENST00000578523 652 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 VN1R80P-201ENST00000597126 338 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 RNU4-89P-201ENST00000607443 133 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 MIR6810-201ENST00000622701 70 ntBASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
CCHCR1Q8TD31 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 USP8P1-201ENST00000494673 3183 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 RNU6-335P-201ENST00000364563 113 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 UBE2V1P2-201ENST00000397758 440 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 HLFP1-201ENST00000402375 499 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 AL606923.1-201ENST00000406616 190 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 OR6C66P-201ENST00000414917 930 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 AC083863.1-201ENST00000438811 231 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 RPL26P6-201ENST00000440913 438 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 AC117522.3-201ENST00000507974 584 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 RNU6-1314P-201ENST00000517139 104 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 AC008489.1-201ENST00000524271 483 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 AP004371.1-201ENST00000525240 214 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 AP006587.4-201ENST00000526053 529 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 PSMA3P-201ENST00000555485 635 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 RPS3AP23-202ENST00000574601 686 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 RN7SL600P-201ENST00000581811 299 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 AL356055.1-201ENST00000602528 446 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 AC174048.1-201ENST00000603389 144 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 AC021646.1-201ENST00000605469 484 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 AL591034.3-201ENST00000605511 685 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 AC009248.2-201ENST00000619826 254 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 AC007998.5-201ENST00000622938 237 ntBASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.1□□□□□ -1.75
CCHCR1Q8TD31 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms