Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.86□□□□□ -1.63
SHKBP1Q8TBC3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHKBP1Q8TBC3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHKBP1Q8TBC3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 A2MP1-204ENST00000566278 4130 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AL391987.6-201ENST00000305671 199 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AC138393.1-203ENST00000327086 343 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 MIR137-201ENST00000385223 102 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 RNU6-493P-201ENST00000391321 108 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AL592291.1-201ENST00000403830 352 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 Y_RNA.793-201ENST00000411222 111 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 RNU6-516P-201ENST00000411381 104 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 RNA5SP111-201ENST00000411386 101 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 RPL7AP25-201ENST00000423357 805 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 CKS1BP6-201ENST00000424932 240 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AL133244.1-201ENST00000456007 258 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 Y_RNA.644-201ENST00000459006 113 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AC108751.2-201ENST00000469993 231 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 SNORA31.6-201ENST00000516241 130 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 Y_RNA.674-201ENST00000516362 113 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AC034114.1-201ENST00000520293 285 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AC100870.1-201ENST00000522035 505 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 CBX3P8-201ENST00000532412 525 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 TOMM20P2-201ENST00000540082 421 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AL355877.2-201ENST00000603670 358 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AL670379.6-201ENST00000603753 252 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AL670379.1-201ENST00000604752 252 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AL670379.5-201ENST00000605253 252 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AL670379.8-201ENST00000605353 252 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AL670379.7-201ENST00000605823 252 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AC006023.2-201ENST00000609916 167 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 AL589994.2-201ENST00000621124 579 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 HSPA8P4-201ENST00000511877 1920 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 SMG1P4-204ENST00000523028 4131 ntBASIC4.85□□□□□ -1.63
SHKBP1Q8TBC3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 CDC27P2-201ENST00000425026 1922 ntBASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 Y_RNA.48-201ENST00000362710 103 ntBASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 RNY1P16-201ENST00000363063 111 ntBASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 RNA5SP509-201ENST00000364577 119 ntBASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 Y_RNA.269-201ENST00000364685 89 ntBASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 RNU6-1081P-201ENST00000384537 107 ntBASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 RNU6-130P-201ENST00000411112 103 ntBASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 FABP5P13-201ENST00000452144 328 ntBASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 Y_RNA.683-201ENST00000516508 93 ntBASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 CBX3P4-201ENST00000538909 354 ntBASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 AC023575.1-201ENST00000580510 358 ntBASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 RPS29P30-201ENST00000600975 111 ntBASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 AL158032.1-201ENST00000605401 106 ntBASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 AC011944.2-201ENST00000624440 683 ntBASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 AL450472.1-202ENST00000637286 180 ntBASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SHKBP1Q8TBC3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.84□□□□□ -1.64
SHKBP1Q8TBC3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SHKBP1Q8TBC3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
SHKBP1Q8TBC3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SHKBP1Q8TBC3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms