Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 RNU6-432P-201ENST00000384196 109 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 Y_RNA.517-201ENST00000384551 106 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 SNORD67-201ENST00000390833 111 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 RNU4-65P-201ENST00000410473 140 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC010975.2-201ENST00000427781 588 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 RPL31P35-201ENST00000431058 377 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AL358934.1-201ENST00000432346 324 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC024082.2-201ENST00000434771 238 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 RPL26P6-201ENST00000440913 438 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 MTND1P9-201ENST00000453775 944 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 RNU7-170P-201ENST00000459303 61 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC021205.2-201ENST00000480069 347 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 RPS4XP22-201ENST00000480755 780 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 RPL23AP41-201ENST00000484754 458 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC138853.1-201ENST00000503549 823 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC010587.1-201ENST00000505809 469 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC105914.1-201ENST00000511798 226 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC114797.1-201ENST00000514003 728 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 SNORA31.8-201ENST00000516327 108 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 RNU6-430P-201ENST00000517078 107 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 RNU6-1220P-201ENST00000517126 108 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 SNORA31.22-201ENST00000517204 135 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC103783.1-201ENST00000520506 373 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AP003392.2-201ENST00000527269 208 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AP000857.1-201ENST00000532151 543 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 SNRPGP16-201ENST00000533275 226 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC011468.4-201ENST00000603942 409 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AL161729.4-201ENST00000604650 476 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AP000860.1-201ENST00000605250 559 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC245517.5-201ENST00000611529 162 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AL592295.2-201ENST00000612578 206 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC004696.1-201ENST00000614345 607 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC091834.1-201ENST00000614543 472 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 MIR6130-201ENST00000619419 109 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC009268.2-201ENST00000621925 457 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC019226.1-201ENST00000625666 515 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 PISRT1-201ENST00000626175 531 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC009812.4-201ENST00000569134 1805 ntBASIC2.42□□□□□ -2.02
LINC01006Q8NI28 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
LINC01006Q8NI28 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.41□□□□□ -2.02
LINC01006Q8NI28 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC01006Q8NI28 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.41□□□□□ -2.02
LINC01006Q8NI28 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LINC01006Q8NI28 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LINC01006Q8NI28 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
LINC01006Q8NI28 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.41□□□□□ -2.02
LINC01006Q8NI28 RNY3P13-201ENST00000365542 102 ntBASIC2.41□□□□□ -2.02
LINC01006Q8NI28 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
LINC01006Q8NI28 MIR184-201ENST00000384962 84 ntBASIC2.41□□□□□ -2.02
LINC01006Q8NI28 UBE2FP1-201ENST00000416536 447 ntBASIC2.41□□□□□ -2.02
LINC01006Q8NI28 MTCO1P21-201ENST00000416634 589 ntBASIC2.41□□□□□ -2.02
LINC01006Q8NI28 AL159169.1-201ENST00000421119 127 ntBASIC2.41□□□□□ -2.02
LINC01006Q8NI28 PPP1R11P2-201ENST00000423543 382 ntBASIC2.41□□□□□ -2.02
LINC01006Q8NI28 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.41□□□□□ -2.02
LINC01006Q8NI28 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.41□□□□□ -2.02
LINC01006Q8NI28 MTATP6P4-201ENST00000427725 675 ntBASIC2.41□□□□□ -2.02
LINC01006Q8NI28 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.41□□□□□ -2.02
LINC01006Q8NI28 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
LINC01006Q8NI28 AC073614.1-201ENST00000438690 650 ntBASIC2.41□□□□□ -2.02
LINC01006Q8NI28 HMGB3P11-201ENST00000440127 604 ntBASIC2.41□□□□□ -2.02
LINC01006Q8NI28 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC01006Q8NI28 TXNP1-201ENST00000441872 371 ntBASIC2.41□□□□□ -2.02
LINC01006Q8NI28 AL121871.1-201ENST00000443413 436 ntBASIC2.41□□□□□ -2.02
LINC01006Q8NI28 AC079448.1-201ENST00000449377 373 ntBASIC2.41□□□□□ -2.02
LINC01006Q8NI28 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC01006Q8NI28 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.41□□□□□ -2.02
LINC01006Q8NI28 RPL23AP31-201ENST00000456160 467 ntBASIC2.41□□□□□ -2.02
LINC01006Q8NI28 RPS15AP36-201ENST00000492022 382 ntBASIC2.41□□□□□ -2.02
LINC01006Q8NI28 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC01006Q8NI28 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.41□□□□□ -2.02
LINC01006Q8NI28 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC01006Q8NI28 RN7SKP298-201ENST00000515950 94 ntBASIC2.41□□□□□ -2.02
LINC01006Q8NI28 RNU1-61P-201ENST00000516107 151 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms