Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AP003122.3-201ENST00000526316 255 ntBASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 COX6CP5-201ENST00000527162 228 ntBASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 AC084851.1-201ENST00000529105 249 ntBASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 WISP1-OT1-201ENST00000602893 642 ntBASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 AL353778.1-201ENST00000603149 408 ntBASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 AL356321.1-201ENST00000621360 228 ntBASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 CU459211.1-201ENST00000635667 749 ntBASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 MTND4P4-201ENST00000439033 1366 ntBASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
LINC01561Q8N1V8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 RNU6-461P-201ENST00000364195 107 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 RNU6-188P-201ENST00000364207 107 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 RNU6-628P-201ENST00000410675 107 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AC080125.1-201ENST00000414888 684 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 RPS15AP12-201ENST00000419498 388 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AC092447.3-201ENST00000426027 686 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AL451062.2-201ENST00000427515 271 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AC093151.1-201ENST00000427711 313 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AC119618.1-201ENST00000434191 222 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 MTND4P25-201ENST00000441039 533 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 USP9YP15-201ENST00000442391 422 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 MTCYBP35-201ENST00000503630 1137 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AF131216.2-201ENST00000512316 564 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AC007536.1-201ENST00000533382 349 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AC021739.1-201ENST00000559631 174 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 OR1M4P-201ENST00000589199 287 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AC024220.1-201ENST00000603675 484 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 Z99289.3-201ENST00000605586 594 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AP002360.4-201ENST00000606980 481 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AL589743.7-201ENST00000612637 233 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AC027807.2-201ENST00000616099 408 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AC108479.2-201ENST00000617314 601 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AL449363.1-201ENST00000617815 186 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AL589994.2-201ENST00000621124 579 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AP000770.2-201ENST00000623694 100 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 AF246928.1-201ENST00000623768 87 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 MIR6830-201ENST00000636015 70 ntBASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LINC01561Q8N1V8 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 Y_RNA.534-201ENST00000384599 112 ntBASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 RPL21P75-201ENST00000396599 483 ntBASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 RPL21P28-201ENST00000401418 483 ntBASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 AL592114.1-201ENST00000403842 483 ntBASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 MTCYBP36-201ENST00000404146 440 ntBASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 Y_RNA.598-201ENST00000410480 95 ntBASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 CYCSP4-201ENST00000429682 331 ntBASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 RPS6P15-201ENST00000431996 751 ntBASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 MICF-203ENST00000432679 129 ntBASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 CST9LP2-201ENST00000437612 320 ntBASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 AC009296.1-201ENST00000443146 155 ntBASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 ST13P20-201ENST00000447996 1065 ntBASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 AL133217.1-201ENST00000450980 425 ntBASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 RPL21P39-201ENST00000463605 483 ntBASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 RPL21P93-201ENST00000480465 489 ntBASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 AC087190.1-201ENST00000484462 480 ntBASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 AC007182.2-201ENST00000489251 402 ntBASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 AC093591.1-201ENST00000491435 481 ntBASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 RPL21P129-201ENST00000491732 478 ntBASIC2.28□□□□□ -2.04
LINC01561Q8N1V8 RPL21P16-201ENST00000495531 483 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms