Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 SYF2P1-201ENST00000550658 413 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 AL442163.3-201ENST00000554110 156 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 NDUFB4P11-201ENST00000560510 395 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 Z83818.1-201ENST00000603584 150 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 Y_RNA.772-201ENST00000606692 102 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 AC004852.3-201ENST00000614131 326 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 PRO1804-201ENST00000623780 2050 ntBASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SH3RF1Q7Z6J0 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 RNA5SP494-201ENST00000410653 129 ntBASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 COX6CP10-201ENST00000416832 224 ntBASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 MTND3P9-201ENST00000429526 346 ntBASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 RPL23AP2-201ENST00000471227 466 ntBASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 RNA5SP43-201ENST00000516559 110 ntBASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 AC136932.1-201ENST00000574771 208 ntBASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 BDH2P1-201ENST00000602288 736 ntBASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 AC105254.2-201ENST00000603636 436 ntBASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 AL590392.1-201ENST00000604960 446 ntBASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 U2.14-201ENST00000615943 113 ntBASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 AP001005.3-201ENST00000622049 129 ntBASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SH3RF1Q7Z6J0 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 OR9K1P-202ENST00000641111 3217 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 PHKBP1-201ENST00000450951 1951 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 Y_RNA.143-201ENST00000363520 106 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 MTCYBP2-201ENST00000407745 171 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 RNA5SP113-201ENST00000410486 84 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 RN7SKP27-201ENST00000410684 333 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 PPP1R11P2-201ENST00000423543 382 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 AC090774.1-201ENST00000435925 246 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 AL049830.2-201ENST00000480072 201 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 AC010469.2-201ENST00000496412 480 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 SEPT14P8-201ENST00000508026 178 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 AC074198.2-201ENST00000508153 258 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 RNU6-479P-201ENST00000516348 105 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 AL590705.4-201ENST00000532209 134 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 AC004024.1-201ENST00000549244 247 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 AL110118.1-201ENST00000553543 400 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 AL020997.2-201ENST00000602607 184 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 AL391358.1-201ENST00000605342 190 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 AC138965.3-201ENST00000623875 498 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 MIR4496-201ENST00000635896 61 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 AL596275.2-204ENST00000641628 552 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 AL596275.2-206ENST00000641957 626 ntBASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.68□□□□□ -1.5
SH3RF1Q7Z6J0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SH3RF1Q7Z6J0 SDAD1P2-201ENST00000441308 2028 ntBASIC5.67□□□□□ -1.5
SH3RF1Q7Z6J0 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.67□□□□□ -1.5
SH3RF1Q7Z6J0 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SH3RF1Q7Z6J0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.67□□□□□ -1.5
SH3RF1Q7Z6J0 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SH3RF1Q7Z6J0 RNU6-22P-201ENST00000384355 107 ntBASIC5.67□□□□□ -1.5
SH3RF1Q7Z6J0 Y_RNA.581-201ENST00000391017 97 ntBASIC5.67□□□□□ -1.5
SH3RF1Q7Z6J0 RNU2-43P-201ENST00000410306 190 ntBASIC5.67□□□□□ -1.5
SH3RF1Q7Z6J0 RPL17P36-201ENST00000420302 549 ntBASIC5.67□□□□□ -1.5
SH3RF1Q7Z6J0 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.67□□□□□ -1.5
SH3RF1Q7Z6J0 AC007389.2-201ENST00000434630 306 ntBASIC5.67□□□□□ -1.5
SH3RF1Q7Z6J0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms