Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 MIR591-201ENST00000385290 95 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 RNU6-387P-201ENST00000411331 105 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 RPL30P2-201ENST00000414021 291 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 ARF4P2-201ENST00000430209 526 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 COX6B1P7-201ENST00000430845 235 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 AL358472.1-201ENST00000431295 329 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 NEFMP1-201ENST00000443423 1006 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 AL136097.1-201ENST00000456945 913 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 RNA5SP246-201ENST00000458909 119 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 RPL23AP11-201ENST00000475260 469 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 HMGB1P22-201ENST00000505315 124 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 AC117522.3-201ENST00000507974 584 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 AC098591.2-201ENST00000510152 315 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 GMPSP1-201ENST00000514075 579 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 AC099522.1-202ENST00000514718 367 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 RNU6-1038P-201ENST00000516516 104 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 RNU6-1314P-201ENST00000517139 104 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 AC022690.1-201ENST00000526681 550 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 AC008521.1-201ENST00000587471 187 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 AC067852.3-201ENST00000589177 561 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 AC093913.1-201ENST00000614178 329 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 uc_338.34-201ENST00000617467 174 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 AC007998.5-201ENST00000622938 237 ntBASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTCHD4Q6ZW05 MTND4P35-201ENST00000604257 1375 ntBASIC3.65□□□□□ -1.82
PTCHD4Q6ZW05 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
PTCHD4Q6ZW05 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.65□□□□□ -1.82
PTCHD4Q6ZW05 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
PTCHD4Q6ZW05 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PTCHD4Q6ZW05 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PTCHD4Q6ZW05 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.65□□□□□ -1.82
PTCHD4Q6ZW05 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 RNU1-18P-201ENST00000363062 164 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 Y_RNA.166-201ENST00000363730 102 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 RNA5SP509-201ENST00000364577 119 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 SNORA36C-201ENST00000384289 132 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 RNU6-550P-201ENST00000391057 101 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 AL356432.1-201ENST00000405809 419 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 RNU4-26P-201ENST00000410270 107 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 AL353678.1-201ENST00000422735 741 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 MTCO3P46-201ENST00000425787 232 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 AC008850.1-201ENST00000427546 362 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 RPL7L1P10-201ENST00000427790 463 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 TAAR7P-201ENST00000436141 242 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 AL590639.1-201ENST00000456484 337 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 AC091885.1-201ENST00000506658 268 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 AC112206.3-201ENST00000514578 389 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 RNU6-123P-201ENST00000516163 102 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 Y_RNA.665-201ENST00000516177 98 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 RANP3-201ENST00000530970 276 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 AL118558.2-201ENST00000556294 238 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 RPL23AP84-201ENST00000571193 464 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 RPS3AP23-202ENST00000574601 686 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 AC025627.2-201ENST00000576220 160 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 AC013553.2-201ENST00000604244 589 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 AL356218.2-201ENST00000605264 187 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 AL158032.1-201ENST00000605401 106 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 AC012409.4-201ENST00000612923 249 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 AL390240.1-201ENST00000612950 384 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 MIR7151-201ENST00000617477 60 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 MIR6730-201ENST00000622213 67 ntBASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTCHD4Q6ZW05 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 AL353746.1-201ENST00000566293 6881 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 TPTE2P4-201ENST00000258589 1605 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 RNU4-73P-201ENST00000363164 141 ntBASIC3.64□□□□□ -1.83
PTCHD4Q6ZW05 RNU6-173P-201ENST00000364215 104 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms