Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 RPL21P103-201ENST00000479921 488 ntBASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 AC068781.1-201ENST00000488231 618 ntBASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 HMGB3P16-201ENST00000508037 287 ntBASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 AC093853.1-201ENST00000515689 483 ntBASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 HIGD1AP3-201ENST00000515857 278 ntBASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 AC024224.1-201ENST00000538284 609 ntBASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 OR11H5P-201ENST00000554039 926 ntBASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 RPL23AP92-201ENST00000603609 255 ntBASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 AC011890.2-201ENST00000613393 294 ntBASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 AL138726.1-201ENST00000614873 333 ntBASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 U2.1-201ENST00000618978 145 ntBASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 AL596245.1-201ENST00000618994 362 ntBASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 MIR6500-201ENST00000622700 86 ntBASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 AC083843.3-201ENST00000623679 2186 ntBASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.58□□□□□ -1.68
CNKSR3Q6P9H4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 LINC01109-201ENST00000603837 3081 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 AC032011.1-201ENST00000611703 1549 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 AL592182.3-201ENST00000642132 3304 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 SNORD46.1-201ENST00000364139 104 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 RNU6-99P-201ENST00000364721 107 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 SNORD115-7-201ENST00000365306 82 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 Y_RNA.404-201ENST00000383978 102 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 RNU6-209P-201ENST00000384118 107 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 EIF4E2P1-201ENST00000393781 255 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 AC114491.1-201ENST00000416095 246 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 PDSS1P1-201ENST00000422953 1114 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 PSMA6P3-201ENST00000428242 164 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 GOT2P5-201ENST00000433995 546 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 UBE2V1P13-201ENST00000436983 439 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 RAC1P7-201ENST00000445367 377 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 RPL29P29-201ENST00000448725 423 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 PCNPP5-201ENST00000452246 481 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 AC110792.1-201ENST00000491826 472 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 AC068305.1-201ENST00000497406 726 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 AC008526.1-201ENST00000509149 338 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 RNU7-51P-201ENST00000516560 62 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 DEFB109D-201ENST00000529497 240 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 AC135001.1-201ENST00000544546 283 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 HMGB3P26-201ENST00000560051 582 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 RPL23AP97-201ENST00000568955 471 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 AC090615.1-201ENST00000577519 154 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 AC010201.1-201ENST00000605051 540 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 AC012442.3-202ENST00000636742 206 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 AC073136.1-201ENST00000449426 2884 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 LINC01355-201ENST00000566551 5444 ntBASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNKSR3Q6P9H4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 RNA5SP387-201ENST00000364226 106 ntBASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 Y_RNA.473-201ENST00000384333 102 ntBASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 MT-TC-201ENST00000387405 66 ntBASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 RNU6-1109P-201ENST00000391187 107 ntBASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 AL359643.1-201ENST00000404109 423 ntBASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 ARL5AP4-201ENST00000430731 512 ntBASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 RPL23AP89-201ENST00000439324 255 ntBASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 AL500522.2-201ENST00000448562 343 ntBASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 RPS29P19-201ENST00000479709 171 ntBASIC4.56□□□□□ -1.68
CNKSR3Q6P9H4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms