Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 NRON-201ENST00000517270 370 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 AC022616.3-201ENST00000523940 148 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC93Q567U6 AL512360.1-201ENST00000555346 234 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 AP005205.1-201ENST00000563503 508 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 KC877982.1-201ENST00000602313 470 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 uc_338.12-201ENST00000616344 181 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCDC93Q567U6 AC006338.1-201ENST00000618453 749 ntBASIC4.34□□□□□ -1.71
CCDC93Q567U6 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC93Q567U6 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.34□□□□□ -1.71
CCDC93Q567U6 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC93Q567U6 AL138713.1-201ENST00000624026 2130 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC93Q567U6 AC138915.3-201ENST00000562908 1389 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 Y_RNA.159-201ENST00000363674 87 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 RNU5A-8P-201ENST00000364102 114 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 RNY1P12-201ENST00000364251 105 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC93Q567U6 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CCDC93Q567U6 Y_RNA.573-201ENST00000384763 105 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 MIR19A-201ENST00000384878 82 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 RNA5SP129-201ENST00000410276 118 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.33□□□□□ -1.72
CCDC93Q567U6 USP9YP27-201ENST00000418455 438 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC93Q567U6 NEK4P1-201ENST00000433383 879 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 RPL23AP20-201ENST00000447965 421 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 HMGN2P16-201ENST00000456802 261 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 TRBV12-2-201ENST00000489763 344 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 AC020893.1-201ENST00000502452 580 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 AC004062.1-201ENST00000509926 645 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC93Q567U6 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC93Q567U6 Y_RNA.704-201ENST00000516851 102 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 IGKV2D-23-201ENST00000518179 286 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 IGKV2-26-201ENST00000518305 343 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC93Q567U6 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC93Q567U6 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC93Q567U6 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC93Q567U6 AC025678.1-201ENST00000567861 338 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 MIR4644-201ENST00000579929 84 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 COX6CP3-201ENST00000580869 223 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC93Q567U6 AC110741.2-201ENST00000605278 268 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 AC004067.1-201ENST00000608733 700 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 AC002553.4-201ENST00000616896 331 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCDC93Q567U6 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CCDC93Q567U6 AL356585.4-201ENST00000623078 1229 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 MIR1321-201ENST00000637766 79 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 AC099654.14-201ENST00000638599 341 ntBASIC4.33□□□□□ -1.72
CCDC93Q567U6 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC93Q567U6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC93Q567U6 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CCDC93Q567U6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC93Q567U6 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CCDC93Q567U6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCDC93Q567U6 RNU6-169P-201ENST00000365336 107 ntBASIC4.32□□□□□ -1.72
CCDC93Q567U6 RNU6-456P-201ENST00000384493 107 ntBASIC4.32□□□□□ -1.72
CCDC93Q567U6 MTCO1P20-201ENST00000425366 358 ntBASIC4.32□□□□□ -1.72
CCDC93Q567U6 AC137499.1-201ENST00000427602 88 ntBASIC4.32□□□□□ -1.72
CCDC93Q567U6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.32□□□□□ -1.72
CCDC93Q567U6 HMGB1P31-201ENST00000437242 427 ntBASIC4.32□□□□□ -1.72
CCDC93Q567U6 MTCO3P18-201ENST00000440206 761 ntBASIC4.32□□□□□ -1.72
CCDC93Q567U6 AC093156.1-201ENST00000440382 670 ntBASIC4.32□□□□□ -1.72
CCDC93Q567U6 TPT1P14-201ENST00000448018 505 ntBASIC4.32□□□□□ -1.72
CCDC93Q567U6 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC93Q567U6 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC93Q567U6 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC93Q567U6 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC93Q567U6 RNU6-528P-201ENST00000516926 100 ntBASIC4.32□□□□□ -1.72
CCDC93Q567U6 AP003072.2-201ENST00000527756 676 ntBASIC4.32□□□□□ -1.72
CCDC93Q567U6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC93Q567U6 AL121576.1-201ENST00000556055 276 ntBASIC4.32□□□□□ -1.72
CCDC93Q567U6 MIR5004-201ENST00000579078 107 ntBASIC4.32□□□□□ -1.72
CCDC93Q567U6 LARP7P3-201ENST00000579888 337 ntBASIC4.32□□□□□ -1.72
CCDC93Q567U6 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC93Q567U6 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC93Q567U6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC93Q567U6 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC93Q567U6 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CCDC93Q567U6 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCDC93Q567U6 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CCDC93Q567U6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC93Q567U6 AC002546.1-201ENST00000588041 2504 ntBASIC4.31□□□□□ -1.72
CCDC93Q567U6 RNU5E-4P-201ENST00000364931 120 ntBASIC4.31□□□□□ -1.72
CCDC93Q567U6 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC93Q567U6 RNU1-39P-201ENST00000383897 165 ntBASIC4.31□□□□□ -1.72
CCDC93Q567U6 Y_RNA.481-201ENST00000384373 102 ntBASIC4.31□□□□□ -1.72
CCDC93Q567U6 AP000567.1-201ENST00000406413 156 ntBASIC4.31□□□□□ -1.72
CCDC93Q567U6 RN7SKP285-201ENST00000410137 318 ntBASIC4.31□□□□□ -1.72
CCDC93Q567U6 RN7SKP111-201ENST00000410349 271 ntBASIC4.31□□□□□ -1.72
CCDC93Q567U6 RNU4-65P-201ENST00000410473 140 ntBASIC4.31□□□□□ -1.72
CCDC93Q567U6 RNU2-47P-201ENST00000410649 186 ntBASIC4.31□□□□□ -1.72
CCDC93Q567U6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC93Q567U6 AL353193.1-201ENST00000421444 268 ntBASIC4.31□□□□□ -1.72
CCDC93Q567U6 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC93Q567U6 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms