Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 AC004938.1-201ENST00000438468 308 ntBASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 AL357134.1-201ENST00000445848 426 ntBASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 PPIAP21-201ENST00000464473 501 ntBASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 MTND3P25-201ENST00000509243 135 ntBASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 RPL21P9-201ENST00000556149 474 ntBASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 AC090617.3-201ENST00000573670 475 ntBASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 AC083809.1-201ENST00000615051 472 ntBASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 AC073136.1-201ENST00000449426 2884 ntBASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CTC1Q2NKJ3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 PHKBP1-201ENST00000450951 1951 ntBASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 RPL9P7-201ENST00000330965 580 ntBASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 RNVU1-3-201ENST00000364313 161 ntBASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 MIR539-201ENST00000365690 78 ntBASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 CYCSP43-201ENST00000438233 310 ntBASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 AL513043.1-201ENST00000439124 535 ntBASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 IFNA11P-201ENST00000446352 526 ntBASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 RPL21P41-201ENST00000459863 264 ntBASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 COX7A2P2-201ENST00000505291 250 ntBASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 RNU6-168P-201ENST00000516189 101 ntBASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 AC090151.1-201ENST00000520784 730 ntBASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 AP005660.1-201ENST00000522972 293 ntBASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 AL139124.1-201ENST00000609123 421 ntBASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 MIR6780A-201ENST00000615089 68 ntBASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 AC110801.1-201ENST00000623590 212 ntBASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 AC007529.1-201ENST00000418574 2178 ntBASIC5.62□□□□□ -1.51
CTC1Q2NKJ3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 AC079741.1-201ENST00000321498 212 ntBASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 UBE2WP1-201ENST00000362030 340 ntBASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 RNU6-371P-201ENST00000364283 108 ntBASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 SNORA22-201ENST00000383907 134 ntBASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 RNU6-926P-201ENST00000384075 107 ntBASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 ADAM5-202ENST00000399789 1942 ntBASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 AL590704.1-201ENST00000402856 794 ntBASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 MIR1302-4-201ENST00000408701 150 ntBASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 RN7SKP114-201ENST00000410327 279 ntBASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 RPL31P2-201ENST00000413849 377 ntBASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 DDX39BP1-205ENST00000422507 192 ntBASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 UQCRBP2-201ENST00000447827 297 ntBASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 Y_RNA.709-201ENST00000516952 92 ntBASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 IGLVIV-53-201ENST00000520107 367 ntBASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 AC021006.3-201ENST00000530771 192 ntBASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 MIR4270-201ENST00000581799 70 ntBASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 AC067852.4-201ENST00000590314 478 ntBASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 BDH2P1-201ENST00000602288 736 ntBASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 AL137003.2-201ENST00000606924 2538 ntBASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CTC1Q2NKJ3 AL078621.3-201ENST00000623707 2042 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms