Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 OR6C5P-201ENST00000452388 923 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 ANKRD26P4-201ENST00000455755 950 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 MTND4LP3-201ENST00000468320 276 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 ANXA2P1-201ENST00000505539 926 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 RNA5SP76-201ENST00000516277 87 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 SNORD53-201ENST00000579969 78 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 AC008739.2-201ENST00000597006 317 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 AC007621.1-201ENST00000604544 437 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 AC087683.2-201ENST00000611384 326 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 AC087241.4-201ENST00000612441 480 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 AL450472.3-201ENST00000615578 367 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 AC006020.1-201ENST00000420179 1854 ntBASIC3.01□□□□□ -1.93
SHROOM1Q2M3G4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3□□□□□ -1.93
SHROOM1Q2M3G4 AC006378.2-201ENST00000623178 2476 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 RNU4-28P-201ENST00000364739 141 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 RNU6-1200P-201ENST00000384162 107 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 RNU6-198P-201ENST00000384258 104 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3□□□□□ -1.93
SHROOM1Q2M3G4 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3□□□□□ -1.93
SHROOM1Q2M3G4 RPS3AP24-201ENST00000407896 734 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 AC010099.3-201ENST00000423896 409 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 SNRPEP7-201ENST00000438350 220 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 AC011816.1-201ENST00000441346 546 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 COX6CP2-201ENST00000444980 225 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 PAXBP1P1-201ENST00000449315 447 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3□□□□□ -1.93
SHROOM1Q2M3G4 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3□□□□□ -1.93
SHROOM1Q2M3G4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3□□□□□ -1.93
SHROOM1Q2M3G4 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3□□□□□ -1.93
SHROOM1Q2M3G4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3□□□□□ -1.93
SHROOM1Q2M3G4 OR5BM1P-201ENST00000512021 366 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3□□□□□ -1.93
SHROOM1Q2M3G4 RN7SKP24-201ENST00000515888 284 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 RNU6-528P-201ENST00000516926 100 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 AC105185.1-201ENST00000518705 535 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 CKS1BP7-201ENST00000522230 235 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 AP000857.1-201ENST00000532151 543 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3□□□□□ -1.93
SHROOM1Q2M3G4 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3□□□□□ -1.93
SHROOM1Q2M3G4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
SHROOM1Q2M3G4 AP001429.1-201ENST00000602568 530 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 AC022022.2-201ENST00000602989 360 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 AC093424.1-201ENST00000604999 338 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 AL158211.4-201ENST00000606988 584 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3□□□□□ -1.93
SHROOM1Q2M3G4 AC103710.4-201ENST00000609301 899 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 AC069234.5-201ENST00000611056 416 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
SHROOM1Q2M3G4 AC009159.2-201ENST00000617603 606 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 CR381653.2-201ENST00000624041 768 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 MIR6733-201ENST00000635723 61 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 MIR4275-201ENST00000636486 87 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3□□□□□ -1.93
SHROOM1Q2M3G4 MTND5P19-201ENST00000424872 1794 ntBASIC3□□□□□ -1.93
SHROOM1Q2M3G4 AC131280.1-202ENST00000624067 4211 ntBASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 MTCO1P9-201ENST00000505577 1534 ntBASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AP000568.1-201ENST00000282964 442 ntBASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AL161781.1-201ENST00000354277 403 ntBASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 SNORD113-6-201ENST00000363345 75 ntBASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 RNA5SP210-201ENST00000391034 120 ntBASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AL512633.1-201ENST00000399931 655 ntBASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AL590004.2-201ENST00000404787 371 ntBASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AC083875.1-201ENST00000419509 405 ntBASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AC011233.1-201ENST00000422812 283 ntBASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AC090774.1-201ENST00000435925 246 ntBASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AC024589.1-201ENST00000512207 263 ntBASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AC022483.1-201ENST00000514020 567 ntBASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 RN7SKP40-201ENST00000517211 242 ntBASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 ACTR3BP3-201ENST00000565577 979 ntBASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AC011451.2-201ENST00000604303 598 ntBASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AC090186.1-201ENST00000605991 572 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms