Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 RNU6-56P-201ENST00000516986 93 ntBASIC2.49□□□□□ -2.01
RAB40BQ12829 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.49□□□□□ -2.01
RAB40BQ12829 PSMA2P1-201ENST00000526365 646 ntBASIC2.49□□□□□ -2.01
RAB40BQ12829 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.49□□□□□ -2.01
RAB40BQ12829 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.49□□□□□ -2.01
RAB40BQ12829 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.49□□□□□ -2.01
RAB40BQ12829 AC078899.3-201ENST00000599065 212 ntBASIC2.49□□□□□ -2.01
RAB40BQ12829 AC012468.1-201ENST00000604888 430 ntBASIC2.49□□□□□ -2.01
RAB40BQ12829 AC008277.2-201ENST00000605196 797 ntBASIC2.49□□□□□ -2.01
RAB40BQ12829 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RAB40BQ12829 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.49□□□□□ -2.01
RAB40BQ12829 MIR7112-201ENST00000616126 65 ntBASIC2.49□□□□□ -2.01
RAB40BQ12829 SNHG22-203ENST00000617833 660 ntBASIC2.49□□□□□ -2.01
RAB40BQ12829 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RAB40BQ12829 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.49□□□□□ -2.01
RAB40BQ12829 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.49□□□□□ -2.01
RAB40BQ12829 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RAB40BQ12829 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RAB40BQ12829 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.48□□□□□ -2.01
RAB40BQ12829 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.48□□□□□ -2.01
RAB40BQ12829 RNY4P24-201ENST00000362735 96 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 RNU5A-8P-201ENST00000364102 114 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 Y_RNA.333-201ENST00000365274 102 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.48□□□□□ -2.01
RAB40BQ12829 RNU6-278P-201ENST00000390945 109 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 AL359634.1-202ENST00000404721 284 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.48□□□□□ -2.01
RAB40BQ12829 RAP1BP1-201ENST00000412709 553 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.48□□□□□ -2.01
RAB40BQ12829 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.48□□□□□ -2.01
RAB40BQ12829 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.48□□□□□ -2.01
RAB40BQ12829 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.48□□□□□ -2.01
RAB40BQ12829 AC244035.1-201ENST00000430042 390 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.48□□□□□ -2.01
RAB40BQ12829 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.48□□□□□ -2.01
RAB40BQ12829 RPL37P4-201ENST00000448908 268 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 RPL12P25-201ENST00000455592 494 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 BX510359.1-201ENST00000456973 237 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 AL160314.1-201ENST00000490836 438 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 SCARNA13-201ENST00000516672 275 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 RNU6-64P-201ENST00000517119 105 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.48□□□□□ -2.01
RAB40BQ12829 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.48□□□□□ -2.01
RAB40BQ12829 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.48□□□□□ -2.01
RAB40BQ12829 DEFB108A-201ENST00000530110 222 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.48□□□□□ -2.01
RAB40BQ12829 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.48□□□□□ -2.01
RAB40BQ12829 AL391261.3-201ENST00000557194 520 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.48□□□□□ -2.01
RAB40BQ12829 MIR5004-201ENST00000579078 107 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.48□□□□□ -2.01
RAB40BQ12829 MIR4760-201ENST00000585040 80 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 AC020895.1-201ENST00000595362 272 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 AC136601.2-201ENST00000604356 474 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 YPEL5P2-201ENST00000605553 359 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.48□□□□□ -2.01
RAB40BQ12829 OR10AB1P-201ENST00000609613 938 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 AL355472.4-201ENST00000610233 626 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 AC023510.2-201ENST00000622162 746 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 AL136313.1-201ENST00000624804 202 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.48□□□□□ -2.01
RAB40BQ12829 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 AC104454.1-201ENST00000421341 1401 ntBASIC2.48□□□□□ -2.01
RAB40BQ12829 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.48□□□□□ -2.01
RAB40BQ12829 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RAB40BQ12829 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
RAB40BQ12829 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 RNA5SP387-201ENST00000364226 106 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 SNORA48.5-201ENST00000391143 135 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.47□□□□□ -2.01
RAB40BQ12829 SNORA11.1-201ENST00000408133 129 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 RPL23AP39-201ENST00000415533 405 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.47□□□□□ -2.01
RAB40BQ12829 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 RPL7P37-201ENST00000425095 738 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 AC009414.1-201ENST00000427200 443 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.47□□□□□ -2.01
RAB40BQ12829 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.47□□□□□ -2.01
RAB40BQ12829 AL008629.1-201ENST00000438615 184 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.47□□□□□ -2.01
RAB40BQ12829 MTATP6P30-201ENST00000443540 664 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.47□□□□□ -2.01
RAB40BQ12829 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.47□□□□□ -2.01
RAB40BQ12829 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.47□□□□□ -2.01
RAB40BQ12829 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.47□□□□□ -2.01
RAB40BQ12829 AC108059.3-201ENST00000456388 214 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 AC087588.1-201ENST00000462203 316 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RAB40BQ12829 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RAB40BQ12829 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.47□□□□□ -2.01
RAB40BQ12829 TBCAP3-201ENST00000512475 312 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.47□□□□□ -2.01
RAB40BQ12829 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.47□□□□□ -2.01
RAB40BQ12829 RNU6-927P-201ENST00000516199 100 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 RNU6-678P-201ENST00000516832 109 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 RNA5SP290-201ENST00000517133 127 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 SNORA70.24-201ENST00000517233 118 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 AC100870.1-201ENST00000522035 505 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 EEF1A1P37-201ENST00000522748 715 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms