Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HMGCS1Q01581 RNU6-433P-201ENST00000363216 104 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 RNU1-51P-201ENST00000365345 176 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 RSL24D1P4-201ENST00000400938 484 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 RPS4XP8-201ENST00000402039 771 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 snoU13.28-201ENST00000459235 104 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 RPL23AP45-201ENST00000476406 468 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 RPL30P5-201ENST00000494923 336 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 AC119751.5-201ENST00000514077 770 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 MTND5P4-201ENST00000514978 288 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 RNU6-798P-201ENST00000516912 103 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 AC105185.1-201ENST00000518705 535 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 UBTFL10-201ENST00000528532 562 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 OR5BN1P-201ENST00000532955 829 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 HMGB1P14-201ENST00000557424 591 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 AC087465.1-201ENST00000560574 245 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 ACTR3BP3-201ENST00000565577 979 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 RPL23AP84-201ENST00000571193 464 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 MIR3921-201ENST00000577308 85 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.35□□□□□ -2.03
HMGCS1Q01581 SNHG22-203ENST00000617833 660 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 AL603758.1-201ENST00000618654 241 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 MIR6130-201ENST00000619419 109 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 AC068787.1-201ENST00000623908 691 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 AC079597.1-201ENST00000624306 508 ntBASIC2.35□□□□□ -2.03
HMGCS1Q01581 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HMGCS1Q01581 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HMGCS1Q01581 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
HMGCS1Q01581 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGCS1Q01581 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.03
HMGCS1Q01581 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HMGCS1Q01581 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HMGCS1Q01581 MIR21-201ENST00000362134 72 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 RNU6-462P-201ENST00000362659 105 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 RNU5A-1-201ENST00000362698 116 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 RNU6-1078P-201ENST00000364522 103 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 SNORA36C-201ENST00000384289 132 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 RNA5SP354-201ENST00000391247 136 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 MIR320C1-201ENST00000408566 88 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGCS1Q01581 HMGB1P49-201ENST00000418882 569 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 AC083875.1-201ENST00000419509 405 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 AL445669.1-201ENST00000426743 755 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.34□□□□□ -2.03
HMGCS1Q01581 AC129850.1-201ENST00000436203 508 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 ARPC3P1-201ENST00000437218 533 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 Z73417.1-201ENST00000447373 778 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 AP000542.1-201ENST00000448473 371 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 PAXBP1P1-201ENST00000449315 447 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 SNORD11.1-201ENST00000459482 85 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 HSPE1P6-201ENST00000479457 291 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.34□□□□□ -2.03
HMGCS1Q01581 AL049874.1-201ENST00000489560 388 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 RPS27P26-201ENST00000494583 239 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGCS1Q01581 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.34□□□□□ -2.03
HMGCS1Q01581 OR5BM1P-201ENST00000512021 366 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HMGCS1Q01581 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGCS1Q01581 RNU4-29P-201ENST00000515943 174 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 MRPS36P3-201ENST00000519284 130 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.34□□□□□ -2.03
HMGCS1Q01581 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGCS1Q01581 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
HMGCS1Q01581 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.34□□□□□ -2.03
HMGCS1Q01581 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.34□□□□□ -2.03
HMGCS1Q01581 AC090888.1-201ENST00000561335 1141 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.34□□□□□ -2.03
HMGCS1Q01581 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 AL645944.1-201ENST00000603857 493 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 AL136363.1-201ENST00000605349 337 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 AC090132.2-201ENST00000615881 347 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 AC140725.3-201ENST00000616193 880 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 AL607023.1-201ENST00000620045 248 ntBASIC2.34□□□□□ -2.03
HMGCS1Q01581 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.34□□□□□ -2.03
HMGCS1Q01581 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
HMGCS1Q01581 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
HMGCS1Q01581 AC092447.10-201ENST00000620607 1652 ntBASIC2.34□□□□□ -2.04
HMGCS1Q01581 AL136360.1-201ENST00000503377 1900 ntBASIC2.33□□□□□ -2.04
HMGCS1Q01581 SNORD113-6-201ENST00000363345 75 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms