Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
IRF9Q00978 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
IRF9Q00978 UBE2L2-201ENST00000254302 429 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
IRF9Q00978 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.2□□□□□ -1.74
IRF9Q00978 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.2□□□□□ -1.74
IRF9Q00978 RPL23AP69-201ENST00000431134 458 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 FABP5P14-201ENST00000437273 393 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 BRK1P2-201ENST00000442875 223 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.2□□□□□ -1.74
IRF9Q00978 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.2□□□□□ -1.74
IRF9Q00978 snoU13.4-201ENST00000458916 104 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 AC006517.1-201ENST00000480485 328 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 RN7SL459P-201ENST00000481078 302 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 AC009901.1-201ENST00000506703 541 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 HMGB3P15-201ENST00000507326 574 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 AC017037.1-201ENST00000508460 471 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
IRF9Q00978 APOOP4-201ENST00000513530 597 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 Vault.1-201ENST00000516474 102 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 CYCSP27-201ENST00000527643 293 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.2□□□□□ -1.74
IRF9Q00978 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.2□□□□□ -1.74
IRF9Q00978 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.2□□□□□ -1.74
IRF9Q00978 AC012119.1-201ENST00000603184 222 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 AC113403.1-201ENST00000604910 193 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 MIR6798-201ENST00000612887 67 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 MIR6780A-201ENST00000615089 68 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 uc_338.13-201ENST00000618243 179 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 AP000346.3-201ENST00000622821 210 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.2□□□□□ -1.74
IRF9Q00978 AC134503.1-201ENST00000633048 54 ntBASIC4.2□□□□□ -1.74
IRF9Q00978 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
IRF9Q00978 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
IRF9Q00978 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
IRF9Q00978 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
IRF9Q00978 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.2□□□□□ -1.74
IRF9Q00978 ZNF285B-201ENST00000561698 1767 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
IRF9Q00978 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
IRF9Q00978 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
IRF9Q00978 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
IRF9Q00978 OR56B2P-202ENST00000641377 2453 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
IRF9Q00978 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
IRF9Q00978 Y_RNA.162-201ENST00000363683 102 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 RNU6-371P-201ENST00000364283 108 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 SNORD42.2-201ENST00000365570 69 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 RNU6-128P-201ENST00000383976 107 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 RNU6-692P-201ENST00000384496 107 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
IRF9Q00978 MTCYBP4-201ENST00000401524 249 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 RNA5SP306-201ENST00000411087 107 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 AC016397.1-201ENST00000412463 242 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.19□□□□□ -1.74
IRF9Q00978 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.19□□□□□ -1.74
IRF9Q00978 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.19□□□□□ -1.74
IRF9Q00978 SKA2P1-201ENST00000425592 390 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 AL451062.2-201ENST00000427515 271 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 RPL23AP1-201ENST00000428990 471 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 SNAP23P1-201ENST00000433229 246 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 HSPD1P21-201ENST00000436541 245 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 AC069285.2-201ENST00000440210 275 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 AL353748.1-201ENST00000440753 474 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 TXNP1-201ENST00000441872 371 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 RNU7-152P-201ENST00000458982 64 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 AC087884.1-201ENST00000469738 328 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.19□□□□□ -1.74
IRF9Q00978 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.19□□□□□ -1.74
IRF9Q00978 SCARNA15.2-201ENST00000516409 127 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 APOOP3-201ENST00000536787 586 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.19□□□□□ -1.74
IRF9Q00978 AL163153.1-201ENST00000554223 283 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 AC020661.2-201ENST00000560114 134 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 MIR5692A1-201ENST00000580523 69 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 AC234771.5-201ENST00000600161 514 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.19□□□□□ -1.74
IRF9Q00978 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
IRF9Q00978 AL355810.1-201ENST00000614629 552 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.19□□□□□ -1.74
IRF9Q00978 AC067931.1-201ENST00000624190 671 ntBASIC4.19□□□□□ -1.74
IRF9Q00978 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
IRF9Q00978 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
IRF9Q00978 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.19□□□□□ -1.74
IRF9Q00978 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.19□□□□□ -1.74
IRF9Q00978 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
IRF9Q00978 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
IRF9Q00978 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
IRF9Q00978 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
IRF9Q00978 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
IRF9Q00978 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
IRF9Q00978 RNU6-562P-201ENST00000362731 107 ntBASIC4.18□□□□□ -1.74
IRF9Q00978 RN7SKP44-201ENST00000363602 316 ntBASIC4.18□□□□□ -1.74
IRF9Q00978 SNORA7.2-201ENST00000364446 145 ntBASIC4.18□□□□□ -1.74
IRF9Q00978 SNORA37-201ENST00000384504 129 ntBASIC4.18□□□□□ -1.74
IRF9Q00978 SNORA11F-201ENST00000408237 128 ntBASIC4.18□□□□□ -1.74
IRF9Q00978 RNA5SP36-201ENST00000410197 133 ntBASIC4.18□□□□□ -1.74
IRF9Q00978 RNA5SP104-201ENST00000410989 118 ntBASIC4.18□□□□□ -1.74
IRF9Q00978 RPL21P90-201ENST00000415692 466 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms