Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AL359634.1-202ENST00000404721 284 ntBASIC2.73□□□□□ -1.97
RPS4XP62701 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RPS4XP62701 RNU2-33P-201ENST00000410344 192 ntBASIC2.73□□□□□ -1.97
RPS4XP62701 RNU6-920P-201ENST00000410926 92 ntBASIC2.73□□□□□ -1.97
RPS4XP62701 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.73□□□□□ -1.97
RPS4XP62701 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.73□□□□□ -1.97
RPS4XP62701 RPL35AP12-201ENST00000425362 338 ntBASIC2.73□□□□□ -1.97
RPS4XP62701 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.73□□□□□ -1.97
RPS4XP62701 PIGFP3-201ENST00000441918 722 ntBASIC2.73□□□□□ -1.97
RPS4XP62701 GAPDHP27-201ENST00000447427 1020 ntBASIC2.73□□□□□ -1.97
RPS4XP62701 ZNF114P1-201ENST00000453500 292 ntBASIC2.73□□□□□ -1.97
RPS4XP62701 AL031183.1-201ENST00000457667 207 ntBASIC2.73□□□□□ -1.97
RPS4XP62701 AC104472.2-201ENST00000469035 601 ntBASIC2.73□□□□□ -1.97
RPS4XP62701 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.73□□□□□ -1.97
RPS4XP62701 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
RPS4XP62701 MTND4LP22-201ENST00000508209 276 ntBASIC2.73□□□□□ -1.97
RPS4XP62701 OR5BM1P-201ENST00000512021 366 ntBASIC2.73□□□□□ -1.97
RPS4XP62701 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.73□□□□□ -1.97
RPS4XP62701 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.73□□□□□ -1.97
RPS4XP62701 RNU6-759P-201ENST00000516740 103 ntBASIC2.73□□□□□ -1.97
RPS4XP62701 RNA5SP291-201ENST00000517222 105 ntBASIC2.73□□□□□ -1.97
RPS4XP62701 PSMA2P1-201ENST00000526365 646 ntBASIC2.73□□□□□ -1.97
RPS4XP62701 ATP5F1P5-201ENST00000526403 760 ntBASIC2.73□□□□□ -1.97
RPS4XP62701 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RPS4XP62701 MTND4LP18-201ENST00000526864 291 ntBASIC2.73□□□□□ -1.97
RPS4XP62701 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.73□□□□□ -1.97
RPS4XP62701 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.73□□□□□ -1.97
RPS4XP62701 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.73□□□□□ -1.97
RPS4XP62701 MIR3146-201ENST00000580367 79 ntBASIC2.73□□□□□ -1.97
RPS4XP62701 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.73□□□□□ -1.97
RPS4XP62701 MIR7106-201ENST00000612419 65 ntBASIC2.73□□□□□ -1.97
RPS4XP62701 AC090970.3-201ENST00000612566 866 ntBASIC2.73□□□□□ -1.97
RPS4XP62701 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.73□□□□□ -1.97
RPS4XP62701 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.73□□□□□ -1.97
RPS4XP62701 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RPS4XP62701 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RPS4XP62701 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPS4XP62701 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPS4XP62701 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RPS4XP62701 RNU6-1284P-201ENST00000363701 100 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.72□□□□□ -1.97
RPS4XP62701 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
RPS4XP62701 SNORA54-201ENST00000384281 123 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 Y_RNA.510-201ENST00000384511 114 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 Y_RNA.560-201ENST00000384689 102 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
RPS4XP62701 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
RPS4XP62701 RPL17P12-201ENST00000413391 526 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.72□□□□□ -1.97
RPS4XP62701 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.72□□□□□ -1.97
RPS4XP62701 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.72□□□□□ -1.97
RPS4XP62701 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.72□□□□□ -1.97
RPS4XP62701 AC098826.2-201ENST00000452011 651 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.72□□□□□ -1.97
RPS4XP62701 UBE2DNL-203ENST00000474922 222 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 AC096576.1-201ENST00000489014 359 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 RN7SL283P-201ENST00000489055 303 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 AC080014.1-201ENST00000496877 1201 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 AC112204.1-201ENST00000502591 103 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.72□□□□□ -1.97
RPS4XP62701 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.72□□□□□ -1.97
RPS4XP62701 AC010486.2-201ENST00000505572 483 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 AC010265.1-201ENST00000513509 211 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 RNU6-927P-201ENST00000516199 100 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 RNU6-390P-201ENST00000516259 103 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 RNU6-928P-201ENST00000516876 104 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.72□□□□□ -1.97
RPS4XP62701 AC123904.2-201ENST00000548059 300 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 DNAJC8P1-201ENST00000554535 372 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 AC090888.1-201ENST00000561335 1141 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.72□□□□□ -1.97
RPS4XP62701 AC002545.1-201ENST00000592511 181 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 AC104010.1-201ENST00000616889 150 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 AC007318.2-201ENST00000620999 243 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.72□□□□□ -1.97
RPS4XP62701 AF246928.1-201ENST00000623768 87 ntBASIC2.72□□□□□ -1.97
RPS4XP62701 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.72□□□□□ -1.97
RPS4XP62701 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.72□□□□□ -1.97
RPS4XP62701 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RPS4XP62701 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.72□□□□□ -1.97
RPS4XP62701 PABPC1P9-201ENST00000426076 1612 ntBASIC2.71□□□□□ -1.97
RPS4XP62701 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
RPS4XP62701 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
RPS4XP62701 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.71□□□□□ -1.98
RPS4XP62701 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.71□□□□□ -1.98
RPS4XP62701 AC000403.1-201ENST00000613696 3585 ntBASIC2.71□□□□□ -1.98
RPS4XP62701 RNU6-799P-201ENST00000363567 107 ntBASIC2.71□□□□□ -1.98
RPS4XP62701 RNU6-217P-201ENST00000384164 104 ntBASIC2.71□□□□□ -1.98
RPS4XP62701 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.71□□□□□ -1.98
RPS4XP62701 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.71□□□□□ -1.98
RPS4XP62701 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.71□□□□□ -1.98
RPS4XP62701 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.71□□□□□ -1.98
RPS4XP62701 TRIAP1P1-201ENST00000427062 225 ntBASIC2.71□□□□□ -1.98
RPS4XP62701 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.71□□□□□ -1.98
RPS4XP62701 AC244035.1-201ENST00000430042 390 ntBASIC2.71□□□□□ -1.98
RPS4XP62701 AC022018.1-201ENST00000430685 241 ntBASIC2.71□□□□□ -1.98
RPS4XP62701 AC244505.4-201ENST00000434905 287 ntBASIC2.71□□□□□ -1.98
RPS4XP62701 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.71□□□□□ -1.98
RPS4XP62701 AL445567.1-201ENST00000439121 144 ntBASIC2.71□□□□□ -1.98
RPS4XP62701 TRIM60P18-201ENST00000441518 828 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms