Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 Y_RNA.812-201ENST00000610788 101 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 Y_RNA.784-201ENST00000613803 101 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 MIR8058-201ENST00000615737 89 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 Y_RNA.787-201ENST00000616522 101 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 Y_RNA.780-201ENST00000617336 101 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 Y_RNA.801-201ENST00000619005 101 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 MIR6810-201ENST00000622701 70 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 MFSD8-236ENST00000641509 4050 ntBASIC3.13□□□□□ -1.91
ERVFC1-1P60608 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ERVFC1-1P60608 AL353746.1-201ENST00000566293 6881 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 OR56B2P-202ENST00000641377 2453 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AP004289.2-201ENST00000444413 1457 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 RPL32P3-201ENST00000359025 275 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 Y_RNA.100-201ENST00000363141 102 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 Y_RNA.162-201ENST00000363683 102 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 RNU6-263P-201ENST00000363811 107 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 SNORD113.2-201ENST00000364166 89 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 Y_RNA.373-201ENST00000365600 103 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 MIR659-201ENST00000384963 97 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 MIR129-1-201ENST00000384972 72 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 RNU6-821P-201ENST00000390995 107 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 RNU6-754P-201ENST00000391166 107 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AL590004.1-201ENST00000405321 300 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 RNA5SP56-201ENST00000410277 118 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 NCOR1P3-201ENST00000420479 303 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AL451054.2-201ENST00000420896 202 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AC005517.2-201ENST00000424673 553 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AC002075.2-201ENST00000425207 252 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AC093106.2-201ENST00000428212 385 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 PPP1R2P5-201ENST00000457256 603 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 RPL36AP13-201ENST00000457490 317 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 RNU7-66P-201ENST00000459469 62 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 ST13P14-201ENST00000474095 734 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 RPL23AP11-201ENST00000475260 469 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 UBE2CP3-201ENST00000502715 450 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AC091885.1-201ENST00000506658 268 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 CCDC34P1-201ENST00000507441 517 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 RNU6-1038P-201ENST00000516516 104 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 RN7SKP116-201ENST00000516902 319 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 RN7SKP60-201ENST00000516985 239 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 RNA5SP503-201ENST00000517047 117 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 CR383656.7-201ENST00000548164 174 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 MIR4715-201ENST00000584117 79 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AL669831.4-202ENST00000590817 238 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 CTHRC1P1-201ENST00000605383 469 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AC012443.1-201ENST00000605605 231 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AL365204.3-201ENST00000612448 685 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AC093838.1-201ENST00000613014 469 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AL603758.1-201ENST00000618654 241 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 XIST_intron.1-201ENST00000619444 68 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AL161637.1-201ENST00000622380 412 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 AC140479.6-201ENST00000633535 357 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 MIR4496-201ENST00000635896 61 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 UBE3AP2-201ENST00000429033 2259 ntBASIC3.12□□□□□ -1.91
ERVFC1-1P60608 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ERVFC1-1P60608 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms