Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AL133264.1-201ENST00000407157 562 ntBASIC1.69□□□□□ -2.14
AP3S2P59780 SNORA11.4-201ENST00000408823 129 ntBASIC1.69□□□□□ -2.14
AP3S2P59780 RNU2-63P-201ENST00000410792 194 ntBASIC1.69□□□□□ -2.14
AP3S2P59780 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.69□□□□□ -2.14
AP3S2P59780 AL158823.1-201ENST00000418441 478 ntBASIC1.69□□□□□ -2.14
AP3S2P59780 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.69□□□□□ -2.14
AP3S2P59780 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.69□□□□□ -2.14
AP3S2P59780 PTP4A1P7-201ENST00000423476 514 ntBASIC1.69□□□□□ -2.14
AP3S2P59780 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.69□□□□□ -2.14
AP3S2P59780 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.69□□□□□ -2.14
AP3S2P59780 VN1R10P-201ENST00000447106 875 ntBASIC1.69□□□□□ -2.14
AP3S2P59780 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.69□□□□□ -2.14
AP3S2P59780 AC104978.1-201ENST00000449387 391 ntBASIC1.69□□□□□ -2.14
AP3S2P59780 RPS3P1-201ENST00000456781 192 ntBASIC1.69□□□□□ -2.14
AP3S2P59780 RPS20P20-201ENST00000460498 340 ntBASIC1.69□□□□□ -2.14
AP3S2P59780 RPL7P49-201ENST00000471402 708 ntBASIC1.69□□□□□ -2.14
AP3S2P59780 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.69□□□□□ -2.14
AP3S2P59780 RPL23AP41-201ENST00000484754 458 ntBASIC1.69□□□□□ -2.14
AP3S2P59780 AC080014.1-201ENST00000496877 1201 ntBASIC1.69□□□□□ -2.14
AP3S2P59780 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.69□□□□□ -2.14
AP3S2P59780 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.69□□□□□ -2.14
AP3S2P59780 AC017037.2-201ENST00000513850 890 ntBASIC1.69□□□□□ -2.14
AP3S2P59780 RNA5SP281-201ENST00000516504 135 ntBASIC1.69□□□□□ -2.14
AP3S2P59780 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.69□□□□□ -2.14
AP3S2P59780 AC106782.4-201ENST00000568264 210 ntBASIC1.69□□□□□ -2.14
AP3S2P59780 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.69□□□□□ -2.14
AP3S2P59780 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.69□□□□□ -2.14
AP3S2P59780 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.69□□□□□ -2.14
AP3S2P59780 AL138963.2-201ENST00000605137 226 ntBASIC1.69□□□□□ -2.14
AP3S2P59780 AL109618.2-201ENST00000605527 211 ntBASIC1.69□□□□□ -2.14
AP3S2P59780 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.69□□□□□ -2.14
AP3S2P59780 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.69□□□□□ -2.14
AP3S2P59780 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
AP3S2P59780 U6.101-201ENST00000637707 76 ntBASIC1.69□□□□□ -2.14
AP3S2P59780 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
AP3S2P59780 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.69□□□□□ -2.14
AP3S2P59780 MTCO1P9-201ENST00000505577 1534 ntBASIC1.69□□□□□ -2.14
AP3S2P59780 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
AP3S2P59780 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.68□□□□□ -2.14
AP3S2P59780 MIR670-201ENST00000390142 98 ntBASIC1.68□□□□□ -2.14
AP3S2P59780 SNORD65C-201ENST00000390962 71 ntBASIC1.68□□□□□ -2.14
AP3S2P59780 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.68□□□□□ -2.14
AP3S2P59780 NDUFS5P4-201ENST00000412983 318 ntBASIC1.68□□□□□ -2.14
AP3S2P59780 AL592310.1-201ENST00000414330 671 ntBASIC1.68□□□□□ -2.14
AP3S2P59780 AL161449.1-201ENST00000414531 1199 ntBASIC1.68□□□□□ -2.14
AP3S2P59780 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.68□□□□□ -2.14
AP3S2P59780 MTCO3P1-205ENST00000422088 832 ntBASIC1.68□□□□□ -2.14
AP3S2P59780 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.68□□□□□ -2.14
AP3S2P59780 AC027124.2-201ENST00000428249 105 ntBASIC1.68□□□□□ -2.14
AP3S2P59780 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
AP3S2P59780 FABP5P14-201ENST00000437273 393 ntBASIC1.68□□□□□ -2.14
AP3S2P59780 AC093155.1-201ENST00000440164 826 ntBASIC1.68□□□□□ -2.14
AP3S2P59780 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.68□□□□□ -2.14
AP3S2P59780 ATG12P2-201ENST00000456830 416 ntBASIC1.68□□□□□ -2.14
AP3S2P59780 TRBV1-201ENST00000476502 284 ntBASIC1.68□□□□□ -2.14
AP3S2P59780 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.68□□□□□ -2.14
AP3S2P59780 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.68□□□□□ -2.14
AP3S2P59780 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.68□□□□□ -2.14
AP3S2P59780 MRPS33P3-201ENST00000513456 322 ntBASIC1.68□□□□□ -2.14
AP3S2P59780 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.68□□□□□ -2.14
AP3S2P59780 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.68□□□□□ -2.14
AP3S2P59780 SNRPGP18-201ENST00000553000 214 ntBASIC1.68□□□□□ -2.14
AP3S2P59780 AC012435.1-202ENST00000568772 240 ntBASIC1.68□□□□□ -2.14
AP3S2P59780 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.68□□□□□ -2.14
AP3S2P59780 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.68□□□□□ -2.14
AP3S2P59780 AL121652.1-201ENST00000608851 448 ntBASIC1.68□□□□□ -2.14
AP3S2P59780 AC024581.2-201ENST00000619986 252 ntBASIC1.68□□□□□ -2.14
AP3S2P59780 RPS3AP25-201ENST00000411660 793 ntBASIC1.67□□□□□ -2.14
AP3S2P59780 BOLA3P4-201ENST00000418151 400 ntBASIC1.67□□□□□ -2.14
AP3S2P59780 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.67□□□□□ -2.14
AP3S2P59780 AL445685.2-201ENST00000422551 342 ntBASIC1.67□□□□□ -2.14
AP3S2P59780 VN1R42P-201ENST00000424651 344 ntBASIC1.67□□□□□ -2.14
AP3S2P59780 AL590233.1-201ENST00000430017 456 ntBASIC1.67□□□□□ -2.14
AP3S2P59780 AC234064.1-201ENST00000436312 247 ntBASIC1.67□□□□□ -2.14
AP3S2P59780 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
AP3S2P59780 AL136380.1-201ENST00000447970 162 ntBASIC1.67□□□□□ -2.14
AP3S2P59780 RN7SL432P-201ENST00000484057 298 ntBASIC1.67□□□□□ -2.14
AP3S2P59780 RPS27AP10-201ENST00000496103 208 ntBASIC1.67□□□□□ -2.14
AP3S2P59780 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
AP3S2P59780 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
AP3S2P59780 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.67□□□□□ -2.14
AP3S2P59780 RNA5SP112-201ENST00000515937 99 ntBASIC1.67□□□□□ -2.14
AP3S2P59780 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.67□□□□□ -2.14
AP3S2P59780 SRGNP1-201ENST00000603392 451 ntBASIC1.67□□□□□ -2.14
AP3S2P59780 uc_338.14-201ENST00000613162 166 ntBASIC1.67□□□□□ -2.14
AP3S2P59780 AL773524.1-201ENST00000614065 229 ntBASIC1.67□□□□□ -2.14
AP3S2P59780 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
AP3S2P59780 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
AP3S2P59780 AL359854.1-201ENST00000614203 1594 ntBASIC1.67□□□□□ -2.14
AP3S2P59780 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
AP3S2P59780 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.66□□□□□ -2.14
AP3S2P59780 RNA5SP184-201ENST00000411071 108 ntBASIC1.66□□□□□ -2.14
AP3S2P59780 RNA5SP450-201ENST00000411206 102 ntBASIC1.66□□□□□ -2.14
AP3S2P59780 USP9YP19-201ENST00000412165 485 ntBASIC1.66□□□□□ -2.14
AP3S2P59780 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
AP3S2P59780 USP9YP13-201ENST00000417797 480 ntBASIC1.66□□□□□ -2.14
AP3S2P59780 AC008173.1-201ENST00000418901 264 ntBASIC1.66□□□□□ -2.14
AP3S2P59780 AC244453.4-201ENST00000419150 388 ntBASIC1.66□□□□□ -2.14
AP3S2P59780 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.66□□□□□ -2.14
AP3S2P59780 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms