Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.58□□□□□ -1.84
HDAC4P56524 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.58□□□□□ -1.84
HDAC4P56524 AL358934.1-201ENST00000432346 324 ntBASIC3.58□□□□□ -1.84
HDAC4P56524 AC024082.2-201ENST00000434771 238 ntBASIC3.58□□□□□ -1.84
HDAC4P56524 MTND1P4-201ENST00000435196 415 ntBASIC3.58□□□□□ -1.84
HDAC4P56524 RBM43P1-201ENST00000476891 1081 ntBASIC3.58□□□□□ -1.84
HDAC4P56524 AC108860.1-201ENST00000484521 383 ntBASIC3.58□□□□□ -1.84
HDAC4P56524 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.58□□□□□ -1.84
HDAC4P56524 AC010587.1-201ENST00000505809 469 ntBASIC3.58□□□□□ -1.84
HDAC4P56524 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.58□□□□□ -1.84
HDAC4P56524 SNORA70.19-201ENST00000516717 90 ntBASIC3.58□□□□□ -1.84
HDAC4P56524 RNU6-1220P-201ENST00000517126 108 ntBASIC3.58□□□□□ -1.84
HDAC4P56524 MTND1P5-201ENST00000517906 940 ntBASIC3.58□□□□□ -1.84
HDAC4P56524 DEFB108A-201ENST00000530110 222 ntBASIC3.58□□□□□ -1.84
HDAC4P56524 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.58□□□□□ -1.84
HDAC4P56524 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.58□□□□□ -1.84
HDAC4P56524 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.58□□□□□ -1.84
HDAC4P56524 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.58□□□□□ -1.84
HDAC4P56524 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.58□□□□□ -1.84
HDAC4P56524 KC877982.1-201ENST00000602313 470 ntBASIC3.58□□□□□ -1.84
HDAC4P56524 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.58□□□□□ -1.84
HDAC4P56524 AP002826.1-201ENST00000608835 315 ntBASIC3.58□□□□□ -1.84
HDAC4P56524 AC245517.5-201ENST00000611529 162 ntBASIC3.58□□□□□ -1.84
HDAC4P56524 AC093838.1-201ENST00000613014 469 ntBASIC3.58□□□□□ -1.84
HDAC4P56524 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.58□□□□□ -1.84
HDAC4P56524 AC099654.12-201ENST00000639868 649 ntBASIC3.58□□□□□ -1.84
HDAC4P56524 AC005832.2-201ENST00000538921 1430 ntBASIC3.58□□□□□ -1.84
HDAC4P56524 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.58□□□□□ -1.84
HDAC4P56524 AC009812.4-201ENST00000569134 1805 ntBASIC3.58□□□□□ -1.84
HDAC4P56524 AL356274.2-201ENST00000624379 3752 ntBASIC3.58□□□□□ -1.84
HDAC4P56524 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HDAC4P56524 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
HDAC4P56524 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
HDAC4P56524 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HDAC4P56524 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HDAC4P56524 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.57□□□□□ -1.84
HDAC4P56524 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HDAC4P56524 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.57□□□□□ -1.84
HDAC4P56524 RNU6-1042P-201ENST00000384204 107 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 RNU6-517P-201ENST00000384362 110 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 MIR218-2-201ENST00000385006 110 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 RN7SKP111-201ENST00000410349 271 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 Z99755.1-201ENST00000414048 380 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 RPS29P4-201ENST00000414733 161 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.57□□□□□ -1.84
HDAC4P56524 RPS3AP44-201ENST00000425466 790 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.57□□□□□ -1.84
HDAC4P56524 MTATP6P4-201ENST00000427725 675 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.57□□□□□ -1.84
HDAC4P56524 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HDAC4P56524 RPL31P35-201ENST00000431058 377 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 HMGN2P31-201ENST00000432430 273 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.57□□□□□ -1.84
HDAC4P56524 PRDX3P3-201ENST00000447765 522 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.57□□□□□ -1.84
HDAC4P56524 AC093392.2-201ENST00000450682 337 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.57□□□□□ -1.84
HDAC4P56524 MTND1P12-201ENST00000455231 147 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 AL359385.1-201ENST00000456509 365 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HDAC4P56524 AC004924.1-201ENST00000480160 781 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HDAC4P56524 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.57□□□□□ -1.84
HDAC4P56524 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.57□□□□□ -1.84
HDAC4P56524 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HDAC4P56524 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.57□□□□□ -1.84
HDAC4P56524 RNA5SP380-201ENST00000517190 98 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 IGKV2-26-201ENST00000518305 343 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.57□□□□□ -1.84
HDAC4P56524 AP005205.1-201ENST00000563503 508 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.57□□□□□ -1.84
HDAC4P56524 MIR3167-201ENST00000579623 85 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 MIR4513-201ENST00000581077 86 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HDAC4P56524 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.57□□□□□ -1.84
HDAC4P56524 AC004067.1-201ENST00000608733 700 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 uc_338.12-201ENST00000616344 181 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 AL603758.1-201ENST00000618654 241 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HDAC4P56524 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.57□□□□□ -1.84
HDAC4P56524 AC110801.1-201ENST00000623590 212 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 SCARNA15.3-201ENST00000626315 122 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 SCARNA4.1-201ENST00000628597 123 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 OR5AK4P-201ENST00000635912 903 ntBASIC3.57□□□□□ -1.84
HDAC4P56524 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HDAC4P56524 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.57□□□□□ -1.84
HDAC4P56524 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.56□□□□□ -1.84
HDAC4P56524 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HDAC4P56524 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.56□□□□□ -1.84
HDAC4P56524 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HDAC4P56524 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.56□□□□□ -1.84
HDAC4P56524 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
HDAC4P56524 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HDAC4P56524 RPL7P26-201ENST00000333817 754 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 RNU6-282P-201ENST00000365357 103 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HDAC4P56524 RNU6-278P-201ENST00000390945 109 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC4P56524 ELOCP17-201ENST00000414751 326 ntBASIC3.56□□□□□ -1.84
HDAC4P56524 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms