Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 MTCO2P11-201ENST00000431069 680 ntBASIC3.09□□□□□ -1.91
CDH11P55287 AL358934.1-201ENST00000432346 324 ntBASIC3.09□□□□□ -1.91
CDH11P55287 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH11P55287 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH11P55287 ATP5C1P1-201ENST00000441945 895 ntBASIC3.09□□□□□ -1.91
CDH11P55287 AL136380.1-201ENST00000447970 162 ntBASIC3.09□□□□□ -1.91
CDH11P55287 AC132479.1-201ENST00000449160 144 ntBASIC3.09□□□□□ -1.91
CDH11P55287 AC140076.1-201ENST00000449897 361 ntBASIC3.09□□□□□ -1.91
CDH11P55287 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH11P55287 RPL23AP31-201ENST00000456160 467 ntBASIC3.09□□□□□ -1.91
CDH11P55287 AC108860.1-201ENST00000484521 383 ntBASIC3.09□□□□□ -1.91
CDH11P55287 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH11P55287 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH11P55287 SNORA70.18-201ENST00000516696 98 ntBASIC3.09□□□□□ -1.91
CDH11P55287 AC104027.1-201ENST00000521887 300 ntBASIC3.09□□□□□ -1.91
CDH11P55287 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH11P55287 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.09□□□□□ -1.91
CDH11P55287 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDH11P55287 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH11P55287 AC245505.1-201ENST00000556398 224 ntBASIC3.09□□□□□ -1.91
CDH11P55287 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH11P55287 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH11P55287 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH11P55287 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.09□□□□□ -1.91
CDH11P55287 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH11P55287 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH11P55287 AC105224.1-201ENST00000587055 421 ntBASIC3.09□□□□□ -1.91
CDH11P55287 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH11P55287 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH11P55287 AC096577.2-201ENST00000611455 153 ntBASIC3.09□□□□□ -1.91
CDH11P55287 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH11P55287 AL133173.2-201ENST00000614270 90 ntBASIC3.09□□□□□ -1.91
CDH11P55287 MIR7975-201ENST00000619350 68 ntBASIC3.09□□□□□ -1.91
CDH11P55287 MIR4275-201ENST00000636486 87 ntBASIC3.09□□□□□ -1.91
CDH11P55287 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH11P55287 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH11P55287 AC118273.1-201ENST00000525324 3006 ntBASIC3.09□□□□□ -1.91
CDH11P55287 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.09□□□□□ -1.92
CDH11P55287 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.09□□□□□ -1.92
CDH11P55287 MTND4P5-201ENST00000435821 1374 ntBASIC3.09□□□□□ -1.92
CDH11P55287 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.09□□□□□ -1.92
CDH11P55287 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
CDH11P55287 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.92
CDH11P55287 AL079305.1-201ENST00000623159 3008 ntBASIC3.09□□□□□ -1.92
CDH11P55287 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDH11P55287 SNORD56.3-201ENST00000363507 71 ntBASIC3.08□□□□□ -1.92
CDH11P55287 RNU6-1284P-201ENST00000363701 100 ntBASIC3.08□□□□□ -1.92
CDH11P55287 RNU6-173P-201ENST00000364215 104 ntBASIC3.08□□□□□ -1.92
CDH11P55287 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDH11P55287 RNU1-39P-201ENST00000383897 165 ntBASIC3.08□□□□□ -1.92
CDH11P55287 Y_RNA.516-201ENST00000384541 124 ntBASIC3.08□□□□□ -1.92
CDH11P55287 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDH11P55287 RNA5SP293-201ENST00000410527 113 ntBASIC3.08□□□□□ -1.92
CDH11P55287 AF274854.1-201ENST00000413236 615 ntBASIC3.08□□□□□ -1.92
CDH11P55287 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.08□□□□□ -1.92
CDH11P55287 AC119618.1-201ENST00000434191 222 ntBASIC3.08□□□□□ -1.92
CDH11P55287 ARPC3P1-201ENST00000437218 533 ntBASIC3.08□□□□□ -1.92
CDH11P55287 RPS3AP12-201ENST00000443616 753 ntBASIC3.08□□□□□ -1.92
CDH11P55287 C1DP4-201ENST00000455429 424 ntBASIC3.08□□□□□ -1.92
CDH11P55287 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH11P55287 RPS27P29-201ENST00000463110 252 ntBASIC3.08□□□□□ -1.92
CDH11P55287 AC008481.1-201ENST00000463278 396 ntBASIC3.08□□□□□ -1.92
CDH11P55287 RPL21P10-201ENST00000463521 490 ntBASIC3.08□□□□□ -1.92
CDH11P55287 VN1R17P-201ENST00000472048 1090 ntBASIC3.08□□□□□ -1.92
CDH11P55287 AC010631.1-201ENST00000474150 156 ntBASIC3.08□□□□□ -1.92
CDH11P55287 HSPE1P6-201ENST00000479457 291 ntBASIC3.08□□□□□ -1.92
CDH11P55287 RPL9P33-201ENST00000484311 566 ntBASIC3.08□□□□□ -1.92
CDH11P55287 AC114797.1-201ENST00000514003 728 ntBASIC3.08□□□□□ -1.92
CDH11P55287 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.08□□□□□ -1.92
CDH11P55287 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH11P55287 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.08□□□□□ -1.92
CDH11P55287 ERHP1-201ENST00000523006 310 ntBASIC3.08□□□□□ -1.92
CDH11P55287 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH11P55287 ARL2BPP2-201ENST00000550907 489 ntBASIC3.08□□□□□ -1.92
CDH11P55287 AC005951.2-201ENST00000576282 495 ntBASIC3.08□□□□□ -1.92
CDH11P55287 AP001029.3-201ENST00000588063 596 ntBASIC3.08□□□□□ -1.92
CDH11P55287 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH11P55287 AC008277.2-201ENST00000605196 797 ntBASIC3.08□□□□□ -1.92
CDH11P55287 AL136363.1-201ENST00000605349 337 ntBASIC3.08□□□□□ -1.92
CDH11P55287 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH11P55287 SNHG22-203ENST00000617833 660 ntBASIC3.08□□□□□ -1.92
CDH11P55287 AC138649.3-201ENST00000622154 254 ntBASIC3.08□□□□□ -1.92
CDH11P55287 OR5AK4P-201ENST00000635912 903 ntBASIC3.08□□□□□ -1.92
CDH11P55287 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CDH11P55287 AC099654.12-201ENST00000639868 649 ntBASIC3.08□□□□□ -1.92
CDH11P55287 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
CDH11P55287 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.08□□□□□ -1.92
CDH11P55287 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDH11P55287 MTND5P27-201ENST00000428871 1720 ntBASIC3.07□□□□□ -1.92
CDH11P55287 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CDH11P55287 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDH11P55287 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CDH11P55287 DEFB108F-201ENST00000344638 222 ntBASIC3.07□□□□□ -1.92
CDH11P55287 RNU6-181P-201ENST00000363225 107 ntBASIC3.07□□□□□ -1.92
CDH11P55287 SNORA20.2-201ENST00000383922 131 ntBASIC3.07□□□□□ -1.92
CDH11P55287 RNVU1-14-201ENST00000384770 164 ntBASIC3.07□□□□□ -1.92
CDH11P55287 GSTA9P-201ENST00000406231 611 ntBASIC3.07□□□□□ -1.92
CDH11P55287 RNU2-36P-201ENST00000410361 191 ntBASIC3.07□□□□□ -1.92
CDH11P55287 DBIP2-201ENST00000419076 262 ntBASIC3.07□□□□□ -1.92
CDH11P55287 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms