Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.91□□□□□ -1.94
HMGCS2P54868 AC055876.1-202ENST00000567053 138 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 MIR3915-201ENST00000578518 97 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.91□□□□□ -1.94
HMGCS2P54868 BBIP1P1-201ENST00000602999 279 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 AC004853.1-201ENST00000604902 698 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 BCRP9-201ENST00000605312 388 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.91□□□□□ -1.94
HMGCS2P54868 AC106028.5-201ENST00000610332 395 ntBASIC2.91□□□□□ -1.94
HMGCS2P54868 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HMGCS2P54868 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
HMGCS2P54868 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.91□□□□□ -1.94
HMGCS2P54868 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.91□□□□□ -1.94
HMGCS2P54868 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.9□□□□□ -1.94
HMGCS2P54868 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.9□□□□□ -1.94
HMGCS2P54868 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
HMGCS2P54868 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HMGCS2P54868 RNU6-173P-201ENST00000364215 104 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 Y_RNA.234-201ENST00000364409 97 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 Y_RNA.560-201ENST00000384689 102 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 AL031577.2-201ENST00000404133 280 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 RNU2-47P-201ENST00000410649 186 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 RNU6-920P-201ENST00000410926 92 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGCS2P54868 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGCS2P54868 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.9□□□□□ -1.95
HMGCS2P54868 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HMGCS2P54868 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGCS2P54868 UBL5P3-201ENST00000475112 231 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 RPL23AP45-201ENST00000476406 468 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 RPF2P2-201ENST00000504693 896 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 AC006390.1-201ENST00000508068 283 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 AC234781.5-201ENST00000508429 271 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 AC010486.3-201ENST00000511602 785 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.9□□□□□ -1.95
HMGCS2P54868 Y_RNA.688-201ENST00000516565 95 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 AP000873.5-201ENST00000533906 236 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGCS2P54868 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGCS2P54868 RPL23AP84-201ENST00000571193 464 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 AC005951.1-201ENST00000576706 485 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 BDH2P1-201ENST00000602288 736 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 AL133393.1-201ENST00000603277 287 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 Z99497.2-201ENST00000603634 310 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 AC107214.2-201ENST00000608204 634 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.9□□□□□ -1.95
HMGCS2P54868 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.9□□□□□ -1.95
HMGCS2P54868 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HMGCS2P54868 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HMGCS2P54868 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.89□□□□□ -1.95
HMGCS2P54868 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
HMGCS2P54868 RNU6-744P-201ENST00000365557 107 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 RNU6-1316P-201ENST00000384242 108 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 RNA5SP210-201ENST00000391034 120 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.89□□□□□ -1.95
HMGCS2P54868 AL359511.1-201ENST00000402970 211 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 RNA5SP425-201ENST00000410336 112 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 RN7SKP192-201ENST00000411291 327 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 AC080125.1-201ENST00000414888 684 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.89□□□□□ -1.95
HMGCS2P54868 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.89□□□□□ -1.95
HMGCS2P54868 AL139415.2-201ENST00000431968 163 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 OR2B8P-201ENST00000432841 938 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 MTND4LP10-201ENST00000435146 291 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 MTCYBP39-201ENST00000437562 491 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.89□□□□□ -1.95
HMGCS2P54868 AP000542.1-201ENST00000448473 371 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 RPS27AP8-201ENST00000452665 445 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.89□□□□□ -1.95
HMGCS2P54868 snoU13.15-201ENST00000459407 104 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.89□□□□□ -1.95
HMGCS2P54868 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.89□□□□□ -1.95
HMGCS2P54868 RNU6-714P-201ENST00000516963 103 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 RNA5SP380-201ENST00000517190 98 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 CKS1BP7-201ENST00000522230 235 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 MTCO1P47-201ENST00000523889 1271 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 AP000857.1-201ENST00000532151 543 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.89□□□□□ -1.95
HMGCS2P54868 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.89□□□□□ -1.95
HMGCS2P54868 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.89□□□□□ -1.95
HMGCS2P54868 MIR544B-201ENST00000582372 78 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 AC010620.2-201ENST00000600135 313 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 AC013444.2-201ENST00000603317 787 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 MTCYBP22-201ENST00000603788 447 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 AC121247.2-201ENST00000604776 136 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 AC004908.3-201ENST00000610248 625 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 AL353748.2-201ENST00000622148 471 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 AL356266.1-201ENST00000623311 483 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 AF246928.1-201ENST00000623768 87 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 AC007494.3-201ENST00000624660 743 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 MIR3974-201ENST00000637126 96 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 MTND5P19-201ENST00000424872 1794 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
HMGCS2P54868 AC090740.1-201ENST00000623193 2262 ntBASIC2.89□□□□□ -1.95
HMGCS2P54868 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms