Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MTND1P12-201ENST00000455231 147 ntBASIC3.13□□□□□ -1.91
PDX1P52945 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PDX1P52945 AC010587.1-201ENST00000505809 469 ntBASIC3.13□□□□□ -1.91
PDX1P52945 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.13□□□□□ -1.91
PDX1P52945 RNA5SP468-201ENST00000516782 93 ntBASIC3.13□□□□□ -1.91
PDX1P52945 RNA5SP337-201ENST00000517007 109 ntBASIC3.13□□□□□ -1.91
PDX1P52945 RNU6-1220P-201ENST00000517126 108 ntBASIC3.13□□□□□ -1.91
PDX1P52945 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.13□□□□□ -1.91
PDX1P52945 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.13□□□□□ -1.91
PDX1P52945 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.13□□□□□ -1.91
PDX1P52945 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.13□□□□□ -1.91
PDX1P52945 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.13□□□□□ -1.91
PDX1P52945 AC027807.1-201ENST00000559921 996 ntBASIC3.13□□□□□ -1.91
PDX1P52945 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.13□□□□□ -1.91
PDX1P52945 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.13□□□□□ -1.91
PDX1P52945 AC137800.2-201ENST00000574375 120 ntBASIC3.13□□□□□ -1.91
PDX1P52945 AC012213.3-201ENST00000577199 777 ntBASIC3.13□□□□□ -1.91
PDX1P52945 MIR4513-201ENST00000581077 86 ntBASIC3.13□□□□□ -1.91
PDX1P52945 AC090578.1-201ENST00000604955 591 ntBASIC3.13□□□□□ -1.91
PDX1P52945 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.13□□□□□ -1.91
PDX1P52945 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PDX1P52945 AC017071.1-201ENST00000564407 2204 ntBASIC3.13□□□□□ -1.91
PDX1P52945 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.13□□□□□ -1.91
PDX1P52945 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PDX1P52945 OR1S2-201ENST00000302592 978 ntBASIC3.12□□□□□ -1.91
PDX1P52945 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.12□□□□□ -1.91
PDX1P52945 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PDX1P52945 SNORD116-4-201ENST00000384733 96 ntBASIC3.12□□□□□ -1.91
PDX1P52945 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
PDX1P52945 RPL23AP32-201ENST00000395315 459 ntBASIC3.12□□□□□ -1.91
PDX1P52945 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.12□□□□□ -1.91
PDX1P52945 ELOCP17-201ENST00000414751 326 ntBASIC3.12□□□□□ -1.91
PDX1P52945 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.12□□□□□ -1.91
PDX1P52945 UBE2D3P2-201ENST00000424409 445 ntBASIC3.12□□□□□ -1.91
PDX1P52945 USP9YP36-201ENST00000424581 829 ntBASIC3.12□□□□□ -1.91
PDX1P52945 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.12□□□□□ -1.91
PDX1P52945 ISCA1P6-201ENST00000427740 390 ntBASIC3.12□□□□□ -1.91
PDX1P52945 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.12□□□□□ -1.91
PDX1P52945 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.12□□□□□ -1.91
PDX1P52945 RPS24P1-201ENST00000438550 371 ntBASIC3.12□□□□□ -1.91
PDX1P52945 HMGB1P12-201ENST00000438594 598 ntBASIC3.12□□□□□ -1.91
PDX1P52945 TXNP1-201ENST00000441872 371 ntBASIC3.12□□□□□ -1.91
PDX1P52945 MTATP6P30-201ENST00000443540 664 ntBASIC3.12□□□□□ -1.91
PDX1P52945 AC078785.3-201ENST00000476607 425 ntBASIC3.12□□□□□ -1.91
PDX1P52945 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.12□□□□□ -1.91
PDX1P52945 AC091435.1-201ENST00000505442 584 ntBASIC3.12□□□□□ -1.91
PDX1P52945 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.12□□□□□ -1.91
PDX1P52945 RNU6-840P-201ENST00000517275 65 ntBASIC3.12□□□□□ -1.91
PDX1P52945 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.12□□□□□ -1.91
PDX1P52945 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.12□□□□□ -1.91
PDX1P52945 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.12□□□□□ -1.91
PDX1P52945 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.12□□□□□ -1.91
PDX1P52945 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.12□□□□□ -1.91
PDX1P52945 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.12□□□□□ -1.91
PDX1P52945 MIR2682-201ENST00000580305 110 ntBASIC3.12□□□□□ -1.91
PDX1P52945 AF038458.1-201ENST00000588406 262 ntBASIC3.12□□□□□ -1.91
PDX1P52945 AC087683.1-201ENST00000591187 441 ntBASIC3.12□□□□□ -1.91
PDX1P52945 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.12□□□□□ -1.91
PDX1P52945 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.12□□□□□ -1.91
PDX1P52945 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.12□□□□□ -1.91
PDX1P52945 AC103710.2-201ENST00000609912 942 ntBASIC3.12□□□□□ -1.91
PDX1P52945 AL589743.7-201ENST00000612637 233 ntBASIC3.12□□□□□ -1.91
PDX1P52945 AC008498.1-201ENST00000613012 531 ntBASIC3.12□□□□□ -1.91
PDX1P52945 AL356321.1-201ENST00000621360 228 ntBASIC3.12□□□□□ -1.91
PDX1P52945 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.12□□□□□ -1.91
PDX1P52945 PISRT1-201ENST00000626175 531 ntBASIC3.12□□□□□ -1.91
PDX1P52945 U6.98-201ENST00000637157 84 ntBASIC3.12□□□□□ -1.91
PDX1P52945 ZNF826P-207ENST00000622273 1910 ntBASIC3.12□□□□□ -1.91
PDX1P52945 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.12□□□□□ -1.91
PDX1P52945 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
PDX1P52945 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.12□□□□□ -1.91
PDX1P52945 AC116096.1-201ENST00000566804 2314 ntBASIC3.11□□□□□ -1.91
PDX1P52945 AC007496.3-201ENST00000624987 3443 ntBASIC3.11□□□□□ -1.91
PDX1P52945 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PDX1P52945 RNU6-50P-201ENST00000362356 103 ntBASIC3.11□□□□□ -1.91
PDX1P52945 RNU1-140P-201ENST00000365040 165 ntBASIC3.11□□□□□ -1.91
PDX1P52945 MIR514A1-201ENST00000385133 98 ntBASIC3.11□□□□□ -1.91
PDX1P52945 MIR493-201ENST00000385254 89 ntBASIC3.11□□□□□ -1.91
PDX1P52945 AL359634.1-202ENST00000404721 284 ntBASIC3.11□□□□□ -1.91
PDX1P52945 AL138885.1-201ENST00000405921 675 ntBASIC3.11□□□□□ -1.91
PDX1P52945 RNA5SP229-201ENST00000410809 99 ntBASIC3.11□□□□□ -1.91
PDX1P52945 AL663109.1-201ENST00000411498 844 ntBASIC3.11□□□□□ -1.91
PDX1P52945 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.11□□□□□ -1.91
PDX1P52945 AC007390.1-201ENST00000415722 356 ntBASIC3.11□□□□□ -1.91
PDX1P52945 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.11□□□□□ -1.91
PDX1P52945 C1DP2-201ENST00000418167 426 ntBASIC3.11□□□□□ -1.91
PDX1P52945 RPL31P12-201ENST00000422587 358 ntBASIC3.11□□□□□ -1.91
PDX1P52945 RPL27AP8-201ENST00000424277 446 ntBASIC3.11□□□□□ -1.91
PDX1P52945 ARF4P2-201ENST00000430209 526 ntBASIC3.11□□□□□ -1.91
PDX1P52945 AC107083.1-201ENST00000439643 279 ntBASIC3.11□□□□□ -1.91
PDX1P52945 AC010631.1-201ENST00000474150 156 ntBASIC3.11□□□□□ -1.91
PDX1P52945 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.11□□□□□ -1.91
PDX1P52945 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.11□□□□□ -1.91
PDX1P52945 MTCO2P32-201ENST00000514865 403 ntBASIC3.11□□□□□ -1.91
PDX1P52945 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.11□□□□□ -1.91
PDX1P52945 HMGN1P28-201ENST00000521340 364 ntBASIC3.11□□□□□ -1.91
PDX1P52945 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.11□□□□□ -1.91
PDX1P52945 FAM60DP-201ENST00000524174 632 ntBASIC3.11□□□□□ -1.91
PDX1P52945 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.11□□□□□ -1.91
PDX1P52945 ARL2BPP2-201ENST00000550907 489 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms