Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RPL37P25-201ENST00000507308 276 ntBASIC3.87□□□□□ -1.79
NEK3P51956 RN7SKP83-201ENST00000516512 178 ntBASIC3.87□□□□□ -1.79
NEK3P51956 OR5BN1P-201ENST00000532955 829 ntBASIC3.87□□□□□ -1.79
NEK3P51956 AP003034.1-201ENST00000534621 422 ntBASIC3.87□□□□□ -1.79
NEK3P51956 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.87□□□□□ -1.79
NEK3P51956 EIF1P4-201ENST00000572664 335 ntBASIC3.87□□□□□ -1.79
NEK3P51956 AC012557.2-201ENST00000605919 418 ntBASIC3.87□□□□□ -1.79
NEK3P51956 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.87□□□□□ -1.79
NEK3P51956 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.87□□□□□ -1.79
NEK3P51956 AC039056.2-201ENST00000622261 511 ntBASIC3.87□□□□□ -1.79
NEK3P51956 CR392039.5-201ENST00000623201 510 ntBASIC3.87□□□□□ -1.79
NEK3P51956 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.87□□□□□ -1.79
NEK3P51956 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NEK3P51956 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
NEK3P51956 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NEK3P51956 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NEK3P51956 AC010680.1-201ENST00000590024 3590 ntBASIC3.87□□□□□ -1.79
NEK3P51956 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NEK3P51956 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NEK3P51956 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NEK3P51956 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
NEK3P51956 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
NEK3P51956 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
NEK3P51956 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.86□□□□□ -1.79
NEK3P51956 Y_RNA.367-201ENST00000365544 101 ntBASIC3.86□□□□□ -1.79
NEK3P51956 RNU6-606P-201ENST00000384721 111 ntBASIC3.86□□□□□ -1.79
NEK3P51956 MIR301A-201ENST00000385261 86 ntBASIC3.86□□□□□ -1.79
NEK3P51956 MTATP6P18-201ENST00000417994 673 ntBASIC3.86□□□□□ -1.79
NEK3P51956 AC002075.2-201ENST00000425207 252 ntBASIC3.86□□□□□ -1.79
NEK3P51956 AC093106.2-201ENST00000428212 385 ntBASIC3.86□□□□□ -1.79
NEK3P51956 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.86□□□□□ -1.79
NEK3P51956 TIMM9P3-201ENST00000428659 274 ntBASIC3.86□□□□□ -1.79
NEK3P51956 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.86□□□□□ -1.79
NEK3P51956 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.86□□□□□ -1.79
NEK3P51956 AL591704.1-201ENST00000432574 275 ntBASIC3.86□□□□□ -1.79
NEK3P51956 AC002486.1-201ENST00000435098 391 ntBASIC3.86□□□□□ -1.79
NEK3P51956 Z74696.2-201ENST00000436514 498 ntBASIC3.86□□□□□ -1.79
NEK3P51956 HSPD1P21-201ENST00000436541 245 ntBASIC3.86□□□□□ -1.79
NEK3P51956 SNRPEP9-201ENST00000436794 238 ntBASIC3.86□□□□□ -1.79
NEK3P51956 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.86□□□□□ -1.79
NEK3P51956 AC108078.2-201ENST00000510750 236 ntBASIC3.86□□□□□ -1.79
NEK3P51956 RNU6-720P-201ENST00000516363 108 ntBASIC3.86□□□□□ -1.79
NEK3P51956 SCARNA14-201ENST00000516903 136 ntBASIC3.86□□□□□ -1.79
NEK3P51956 RNA5SP471-201ENST00000516971 106 ntBASIC3.86□□□□□ -1.79
NEK3P51956 SUMO2P20-201ENST00000520803 283 ntBASIC3.86□□□□□ -1.79
NEK3P51956 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NEK3P51956 OR5B19P-201ENST00000531766 928 ntBASIC3.86□□□□□ -1.79
NEK3P51956 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.86□□□□□ -1.79
NEK3P51956 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.86□□□□□ -1.79
NEK3P51956 AC245505.1-201ENST00000556398 224 ntBASIC3.86□□□□□ -1.79
NEK3P51956 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.86□□□□□ -1.79
NEK3P51956 AC024619.4-201ENST00000580924 316 ntBASIC3.86□□□□□ -1.79
NEK3P51956 AL121992.2-201ENST00000606262 256 ntBASIC3.86□□□□□ -1.79
NEK3P51956 AC073308.1-201ENST00000623696 305 ntBASIC3.86□□□□□ -1.79
NEK3P51956 OR5AK4P-201ENST00000635912 903 ntBASIC3.86□□□□□ -1.79
NEK3P51956 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NEK3P51956 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NEK3P51956 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NEK3P51956 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NEK3P51956 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NEK3P51956 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
NEK3P51956 AC103710.2-202ENST00000641454 2853 ntBASIC3.85□□□□□ -1.79
NEK3P51956 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
NEK3P51956 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.85□□□□□ -1.79
NEK3P51956 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NEK3P51956 RN7SKP226-201ENST00000364912 300 ntBASIC3.85□□□□□ -1.79
NEK3P51956 RNU4-48P-201ENST00000365559 182 ntBASIC3.85□□□□□ -1.79
NEK3P51956 SNORA24.1-201ENST00000384401 135 ntBASIC3.85□□□□□ -1.79
NEK3P51956 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NEK3P51956 MIR888-201ENST00000401186 77 ntBASIC3.85□□□□□ -1.79
NEK3P51956 AL589823.1-201ENST00000429577 183 ntBASIC3.85□□□□□ -1.79
NEK3P51956 MTATP6P16-201ENST00000434543 526 ntBASIC3.85□□□□□ -1.79
NEK3P51956 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.85□□□□□ -1.79
NEK3P51956 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.85□□□□□ -1.79
NEK3P51956 DPPA3P1-201ENST00000448050 469 ntBASIC3.85□□□□□ -1.79
NEK3P51956 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.85□□□□□ -1.79
NEK3P51956 RNU7-182P-201ENST00000459009 62 ntBASIC3.85□□□□□ -1.79
NEK3P51956 RPL7P5-201ENST00000471472 736 ntBASIC3.85□□□□□ -1.79
NEK3P51956 AC011825.1-201ENST00000484967 388 ntBASIC3.85□□□□□ -1.79
NEK3P51956 RPS15AP34-201ENST00000487776 387 ntBASIC3.85□□□□□ -1.79
NEK3P51956 AC026801.1-201ENST00000497178 464 ntBASIC3.85□□□□□ -1.79
NEK3P51956 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.85□□□□□ -1.79
NEK3P51956 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.85□□□□□ -1.79
NEK3P51956 RN7SKP209-201ENST00000516888 304 ntBASIC3.85□□□□□ -1.79
NEK3P51956 RNU6-1231P-201ENST00000517185 103 ntBASIC3.85□□□□□ -1.79
NEK3P51956 AC022695.1-201ENST00000522089 237 ntBASIC3.85□□□□□ -1.79
NEK3P51956 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.85□□□□□ -1.79
NEK3P51956 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.85□□□□□ -1.79
NEK3P51956 MIR4429-201ENST00000580105 73 ntBASIC3.85□□□□□ -1.79
NEK3P51956 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.85□□□□□ -1.79
NEK3P51956 AC022893.3-201ENST00000607665 437 ntBASIC3.85□□□□□ -1.79
NEK3P51956 AC122108.2-201ENST00000611946 526 ntBASIC3.85□□□□□ -1.79
NEK3P51956 AL121772.2-201ENST00000614331 297 ntBASIC3.85□□□□□ -1.79
NEK3P51956 MIR8058-201ENST00000615737 89 ntBASIC3.85□□□□□ -1.79
NEK3P51956 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NEK3P51956 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.85□□□□□ -1.79
NEK3P51956 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NEK3P51956 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NEK3P51956 API5P2-201ENST00000397055 1498 ntBASIC3.85□□□□□ -1.79
NEK3P51956 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms