Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF144AP50876 HMGB3P16-201ENST00000508037 287 ntBASIC5.08□□□□□ -1.6
RNF144AP50876 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.08□□□□□ -1.6
RNF144AP50876 AC084851.1-201ENST00000529105 249 ntBASIC5.08□□□□□ -1.6
RNF144AP50876 AL049539.1-201ENST00000611964 459 ntBASIC5.08□□□□□ -1.6
RNF144AP50876 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF144AP50876 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF144AP50876 AL360181.4-201ENST00000621752 134 ntBASIC5.08□□□□□ -1.6
RNF144AP50876 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.08□□□□□ -1.6
RNF144AP50876 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF144AP50876 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF144AP50876 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF144AP50876 PCAT14-202ENST00000627127 3935 ntBASIC5.08□□□□□ -1.6
RNF144AP50876 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF144AP50876 AC233981.2-201ENST00000611524 1614 ntBASIC5.08□□□□□ -1.6
RNF144AP50876 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RNF144AP50876 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF144AP50876 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF144AP50876 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RNF144AP50876 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RNF144AP50876 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF144AP50876 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RNF144AP50876 AC135776.4-201ENST00000624300 1904 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RNF144AP50876 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF144AP50876 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
RNF144AP50876 MIR10A-201ENST00000385043 110 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 DUTP5-201ENST00000406790 469 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 RPS26P47-201ENST00000427219 348 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 RPL7L1P9-201ENST00000431298 745 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 RPS15AP7-201ENST00000439294 405 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF144AP50876 AZGP1P2-201ENST00000454506 345 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF144AP50876 RN7SL515P-201ENST00000463999 297 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 RPS4XP1-201ENST00000482189 787 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 AC006427.1-201ENST00000514359 712 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 RNU5F-8P-201ENST00000515941 111 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 AC022790.1-201ENST00000522872 204 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 AK6P2-201ENST00000549020 471 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF144AP50876 AL049872.1-201ENST00000556323 322 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF144AP50876 AC002545.1-201ENST00000592511 181 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 AC234771.5-201ENST00000600161 514 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 AL161798.1-201ENST00000604630 131 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 AC010632.3-201ENST00000611377 369 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 AC084757.4-201ENST00000616350 526 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 U73479.1-201ENST00000618062 168 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF144AP50876 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF144AP50876 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RNF144AP50876 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF144AP50876 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF144AP50876 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF144AP50876 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
RNF144AP50876 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF144AP50876 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF144AP50876 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF144AP50876 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.07□□□□□ -1.6
RNF144AP50876 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF144AP50876 MAPK10-328ENST00000641553 4009 ntBASIC5.07□□□□□ -1.6
RNF144AP50876 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF144AP50876 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF144AP50876 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF144AP50876 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF144AP50876 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF144AP50876 MIR410-201ENST00000362222 80 ntBASIC5.06□□□□□ -1.6
RNF144AP50876 RNU6-449P-201ENST00000383914 107 ntBASIC5.06□□□□□ -1.6
RNF144AP50876 RNU6-318P-201ENST00000384283 103 ntBASIC5.06□□□□□ -1.6
RNF144AP50876 SNORD56.6-201ENST00000384569 71 ntBASIC5.06□□□□□ -1.6
RNF144AP50876 RNU6-658P-201ENST00000384606 106 ntBASIC5.06□□□□□ -1.6
RNF144AP50876 BTF3L4P2-201ENST00000392798 346 ntBASIC5.06□□□□□ -1.6
RNF144AP50876 RPS4XP3-201ENST00000398541 413 ntBASIC5.06□□□□□ -1.6
RNF144AP50876 LAP3P1-201ENST00000403648 294 ntBASIC5.06□□□□□ -1.6
RNF144AP50876 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.06□□□□□ -1.6
RNF144AP50876 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF144AP50876 AL627311.1-201ENST00000431514 115 ntBASIC5.06□□□□□ -1.6
RNF144AP50876 AP000281.1-201ENST00000444036 316 ntBASIC5.06□□□□□ -1.6
RNF144AP50876 AL161636.2-201ENST00000445179 927 ntBASIC5.06□□□□□ -1.6
RNF144AP50876 AL450023.1-201ENST00000450868 751 ntBASIC5.06□□□□□ -1.6
RNF144AP50876 AC073901.1-201ENST00000462471 408 ntBASIC5.06□□□□□ -1.6
RNF144AP50876 AC008694.2-201ENST00000517591 306 ntBASIC5.06□□□□□ -1.6
RNF144AP50876 AP005660.1-201ENST00000522972 293 ntBASIC5.06□□□□□ -1.6
RNF144AP50876 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF144AP50876 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.06□□□□□ -1.6
RNF144AP50876 RPL21P9-201ENST00000556149 474 ntBASIC5.06□□□□□ -1.6
RNF144AP50876 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF144AP50876 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF144AP50876 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF144AP50876 MIR3614-201ENST00000581261 86 ntBASIC5.06□□□□□ -1.6
RNF144AP50876 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF144AP50876 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.06□□□□□ -1.6
RNF144AP50876 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RNF144AP50876 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF144AP50876 LINC01109-201ENST00000603837 3081 ntBASIC5.06□□□□□ -1.6
RNF144AP50876 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF144AP50876 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF144AP50876 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF144AP50876 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms