Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.14□□□□□ -1.91
LHX1P48742 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.14□□□□□ -1.91
LHX1P48742 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.14□□□□□ -1.91
LHX1P48742 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.14□□□□□ -1.91
LHX1P48742 SCGB1D5P-201ENST00000515134 247 ntBASIC3.14□□□□□ -1.91
LHX1P48742 RNU6-1256P-201ENST00000516539 103 ntBASIC3.14□□□□□ -1.91
LHX1P48742 RNU6-64P-201ENST00000517119 105 ntBASIC3.14□□□□□ -1.91
LHX1P48742 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LHX1P48742 AC124947.2-202ENST00000552735 133 ntBASIC3.14□□□□□ -1.91
LHX1P48742 TRAV37-201ENST00000553906 342 ntBASIC3.14□□□□□ -1.91
LHX1P48742 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.14□□□□□ -1.91
LHX1P48742 LARP7P3-201ENST00000579888 337 ntBASIC3.14□□□□□ -1.91
LHX1P48742 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.14□□□□□ -1.91
LHX1P48742 AC110760.3-201ENST00000598794 467 ntBASIC3.14□□□□□ -1.91
LHX1P48742 AC010620.1-201ENST00000601088 1102 ntBASIC3.14□□□□□ -1.91
LHX1P48742 AC004696.1-201ENST00000614345 607 ntBASIC3.14□□□□□ -1.91
LHX1P48742 AC090132.2-201ENST00000615881 347 ntBASIC3.14□□□□□ -1.91
LHX1P48742 PLCE1P1-201ENST00000622094 305 ntBASIC3.14□□□□□ -1.91
LHX1P48742 AL136313.1-201ENST00000624804 202 ntBASIC3.14□□□□□ -1.91
LHX1P48742 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LHX1P48742 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LHX1P48742 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LHX1P48742 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
LHX1P48742 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.13□□□□□ -1.91
LHX1P48742 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LHX1P48742 U3.4-201ENST00000363352 213 ntBASIC3.13□□□□□ -1.91
LHX1P48742 RNY3P10-201ENST00000384764 102 ntBASIC3.13□□□□□ -1.91
LHX1P48742 MIR591-201ENST00000385290 95 ntBASIC3.13□□□□□ -1.91
LHX1P48742 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LHX1P48742 SNORA48.8-201ENST00000391324 134 ntBASIC3.13□□□□□ -1.91
LHX1P48742 ELOCP17-201ENST00000414751 326 ntBASIC3.13□□□□□ -1.91
LHX1P48742 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.13□□□□□ -1.91
LHX1P48742 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.13□□□□□ -1.91
LHX1P48742 COTL1P1-201ENST00000422309 375 ntBASIC3.13□□□□□ -1.91
LHX1P48742 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.13□□□□□ -1.91
LHX1P48742 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.13□□□□□ -1.91
LHX1P48742 AL139132.1-201ENST00000431587 344 ntBASIC3.13□□□□□ -1.91
LHX1P48742 USP12PX-201ENST00000432383 1057 ntBASIC3.13□□□□□ -1.91
LHX1P48742 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.13□□□□□ -1.91
LHX1P48742 MTND2P22-201ENST00000444325 1033 ntBASIC3.13□□□□□ -1.91
LHX1P48742 AC009237.8-201ENST00000445492 379 ntBASIC3.13□□□□□ -1.91
LHX1P48742 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.13□□□□□ -1.91
LHX1P48742 AC009961.3-201ENST00000449832 765 ntBASIC3.13□□□□□ -1.91
LHX1P48742 AC010631.1-201ENST00000474150 156 ntBASIC3.13□□□□□ -1.91
LHX1P48742 AC012181.1-201ENST00000479895 423 ntBASIC3.13□□□□□ -1.91
LHX1P48742 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.13□□□□□ -1.91
LHX1P48742 AC097462.2-201ENST00000504623 481 ntBASIC3.13□□□□□ -1.91
LHX1P48742 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.13□□□□□ -1.91
LHX1P48742 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.13□□□□□ -1.91
LHX1P48742 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.13□□□□□ -1.91
LHX1P48742 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.13□□□□□ -1.91
LHX1P48742 AL356057.1-201ENST00000533798 831 ntBASIC3.13□□□□□ -1.91
LHX1P48742 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.13□□□□□ -1.91
LHX1P48742 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.13□□□□□ -1.91
LHX1P48742 AL157394.1-201ENST00000562983 1224 ntBASIC3.13□□□□□ -1.91
LHX1P48742 AC008277.2-201ENST00000605196 797 ntBASIC3.13□□□□□ -1.91
LHX1P48742 AC239868.4-201ENST00000608318 671 ntBASIC3.13□□□□□ -1.91
LHX1P48742 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.13□□□□□ -1.91
LHX1P48742 AC092140.2-201ENST00000618027 521 ntBASIC3.13□□□□□ -1.91
LHX1P48742 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.13□□□□□ -1.91
LHX1P48742 Z69908.1-201ENST00000622603 247 ntBASIC3.13□□□□□ -1.91
LHX1P48742 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
LHX1P48742 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.13□□□□□ -1.91
LHX1P48742 MTND5P27-201ENST00000428871 1720 ntBASIC3.13□□□□□ -1.91
LHX1P48742 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.12□□□□□ -1.91
LHX1P48742 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
LHX1P48742 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
LHX1P48742 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LHX1P48742 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LHX1P48742 RNY4P16-201ENST00000364768 94 ntBASIC3.12□□□□□ -1.91
LHX1P48742 RNY3P13-201ENST00000365542 102 ntBASIC3.12□□□□□ -1.91
LHX1P48742 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
LHX1P48742 RPS4XP3-201ENST00000398541 413 ntBASIC3.12□□□□□ -1.91
LHX1P48742 RNA5SP293-201ENST00000410527 113 ntBASIC3.12□□□□□ -1.91
LHX1P48742 RNU2-62P-201ENST00000410868 191 ntBASIC3.12□□□□□ -1.91
LHX1P48742 RN7SKP140-201ENST00000411196 284 ntBASIC3.12□□□□□ -1.91
LHX1P48742 AC006366.1-201ENST00000422002 759 ntBASIC3.12□□□□□ -1.91
LHX1P48742 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.12□□□□□ -1.91
LHX1P48742 AC092573.2-201ENST00000434546 243 ntBASIC3.12□□□□□ -1.91
LHX1P48742 AC107083.1-201ENST00000439643 279 ntBASIC3.12□□□□□ -1.91
LHX1P48742 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.12□□□□□ -1.91
LHX1P48742 Z83846.1-201ENST00000446798 265 ntBASIC3.12□□□□□ -1.91
LHX1P48742 UQCRHP3-201ENST00000451503 251 ntBASIC3.12□□□□□ -1.91
LHX1P48742 SSXP1-201ENST00000453640 473 ntBASIC3.12□□□□□ -1.91
LHX1P48742 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.12□□□□□ -1.91
LHX1P48742 RPS27P29-201ENST00000463110 252 ntBASIC3.12□□□□□ -1.91
LHX1P48742 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.12□□□□□ -1.91
LHX1P48742 AC114797.1-201ENST00000514003 728 ntBASIC3.12□□□□□ -1.91
LHX1P48742 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.12□□□□□ -1.91
LHX1P48742 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
LHX1P48742 AC107934.1-201ENST00000522215 217 ntBASIC3.12□□□□□ -1.91
LHX1P48742 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.12□□□□□ -1.91
LHX1P48742 AC093012.1-202ENST00000549403 582 ntBASIC3.12□□□□□ -1.91
LHX1P48742 EIF4BP1-201ENST00000554881 351 ntBASIC3.12□□□□□ -1.91
LHX1P48742 AC012414.6-201ENST00000568241 401 ntBASIC3.12□□□□□ -1.91
LHX1P48742 MIR4474-201ENST00000579189 78 ntBASIC3.12□□□□□ -1.91
LHX1P48742 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.12□□□□□ -1.91
LHX1P48742 BNIP3P8-201ENST00000597863 560 ntBASIC3.12□□□□□ -1.91
LHX1P48742 AC013553.2-201ENST00000604244 589 ntBASIC3.12□□□□□ -1.91
LHX1P48742 RNU6-87P-201ENST00000607561 108 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms