Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.45□□□□□ -1.86
SOX2P48431 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.45□□□□□ -1.86
SOX2P48431 Y_RNA.689-201ENST00000516589 107 ntBASIC3.45□□□□□ -1.86
SOX2P48431 RNU6-1073P-201ENST00000517182 106 ntBASIC3.45□□□□□ -1.86
SOX2P48431 AC087241.2-201ENST00000535801 324 ntBASIC3.45□□□□□ -1.86
SOX2P48431 AL121576.1-201ENST00000556055 276 ntBASIC3.45□□□□□ -1.86
SOX2P48431 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.45□□□□□ -1.86
SOX2P48431 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.45□□□□□ -1.86
SOX2P48431 MIR7151-201ENST00000617477 60 ntBASIC3.45□□□□□ -1.86
SOX2P48431 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SOX2P48431 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.45□□□□□ -1.86
SOX2P48431 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SOX2P48431 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SOX2P48431 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
SOX2P48431 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
SOX2P48431 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SOX2P48431 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SOX2P48431 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
SOX2P48431 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SOX2P48431 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SOX2P48431 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
SOX2P48431 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SOX2P48431 MTND4P35-201ENST00000604257 1375 ntBASIC3.44□□□□□ -1.86
SOX2P48431 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SOX2P48431 SNORD81.2-201ENST00000365153 76 ntBASIC3.44□□□□□ -1.86
SOX2P48431 Y_RNA.356-201ENST00000365475 113 ntBASIC3.44□□□□□ -1.86
SOX2P48431 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.44□□□□□ -1.86
SOX2P48431 RNU6-14P-201ENST00000384630 106 ntBASIC3.44□□□□□ -1.86
SOX2P48431 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.44□□□□□ -1.86
SOX2P48431 RN7SKP32-201ENST00000410167 303 ntBASIC3.44□□□□□ -1.86
SOX2P48431 RNA5SP111-201ENST00000411386 101 ntBASIC3.44□□□□□ -1.86
SOX2P48431 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.44□□□□□ -1.86
SOX2P48431 AL590139.1-201ENST00000416267 400 ntBASIC3.44□□□□□ -1.86
SOX2P48431 AL451054.2-201ENST00000420896 202 ntBASIC3.44□□□□□ -1.86
SOX2P48431 AL365400.1-201ENST00000431854 640 ntBASIC3.44□□□□□ -1.86
SOX2P48431 UBE2V1P7-201ENST00000446395 340 ntBASIC3.44□□□□□ -1.86
SOX2P48431 AL590639.1-201ENST00000456484 337 ntBASIC3.44□□□□□ -1.86
SOX2P48431 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.44□□□□□ -1.86
SOX2P48431 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.44□□□□□ -1.86
SOX2P48431 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.44□□□□□ -1.86
SOX2P48431 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.44□□□□□ -1.86
SOX2P48431 SNORA31.3-201ENST00000516029 96 ntBASIC3.44□□□□□ -1.86
SOX2P48431 Y_RNA.665-201ENST00000516177 98 ntBASIC3.44□□□□□ -1.86
SOX2P48431 RNU2-58P-201ENST00000516403 183 ntBASIC3.44□□□□□ -1.86
SOX2P48431 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.44□□□□□ -1.86
SOX2P48431 AC107953.1-201ENST00000522216 297 ntBASIC3.44□□□□□ -1.86
SOX2P48431 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.44□□□□□ -1.86
SOX2P48431 PSMA3P-201ENST00000555485 635 ntBASIC3.44□□□□□ -1.86
SOX2P48431 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.44□□□□□ -1.86
SOX2P48431 MED28P6-201ENST00000558776 231 ntBASIC3.44□□□□□ -1.86
SOX2P48431 VN1R80P-201ENST00000597126 338 ntBASIC3.44□□□□□ -1.86
SOX2P48431 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.44□□□□□ -1.86
SOX2P48431 AC103710.3-201ENST00000608157 948 ntBASIC3.44□□□□□ -1.86
SOX2P48431 AC012531.5-201ENST00000611375 151 ntBASIC3.44□□□□□ -1.86
SOX2P48431 AL355810.1-201ENST00000614629 552 ntBASIC3.44□□□□□ -1.86
SOX2P48431 AC112200.1-201ENST00000625015 234 ntBASIC3.44□□□□□ -1.86
SOX2P48431 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.44□□□□□ -1.86
SOX2P48431 MTND5P42-201ENST00000637720 498 ntBASIC3.44□□□□□ -1.86
SOX2P48431 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SOX2P48431 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
SOX2P48431 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SOX2P48431 OTUD4P1-201ENST00000237841 3067 ntBASIC3.43□□□□□ -1.86
SOX2P48431 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SOX2P48431 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SOX2P48431 AP004289.2-201ENST00000444413 1457 ntBASIC3.43□□□□□ -1.86
SOX2P48431 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.43□□□□□ -1.86
SOX2P48431 MIR383-201ENST00000362257 73 ntBASIC3.43□□□□□ -1.86
SOX2P48431 RNU6-288P-201ENST00000363690 104 ntBASIC3.43□□□□□ -1.86
SOX2P48431 RNA5SP399-201ENST00000364003 117 ntBASIC3.43□□□□□ -1.86
SOX2P48431 RNU6-694P-201ENST00000364071 147 ntBASIC3.43□□□□□ -1.86
SOX2P48431 Y_RNA.373-201ENST00000365600 103 ntBASIC3.43□□□□□ -1.86
SOX2P48431 HSPE1P8-201ENST00000406997 288 ntBASIC3.43□□□□□ -1.86
SOX2P48431 AL513331.1-201ENST00000411908 397 ntBASIC3.43□□□□□ -1.86
SOX2P48431 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.43□□□□□ -1.86
SOX2P48431 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.43□□□□□ -1.86
SOX2P48431 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SOX2P48431 PDCL2P1-201ENST00000419302 352 ntBASIC3.43□□□□□ -1.86
SOX2P48431 AL645937.1-202ENST00000421799 937 ntBASIC3.43□□□□□ -1.86
SOX2P48431 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.43□□□□□ -1.86
SOX2P48431 IFNA20P-201ENST00000436840 528 ntBASIC3.43□□□□□ -1.86
SOX2P48431 snoU13.1-201ENST00000459157 104 ntBASIC3.43□□□□□ -1.86
SOX2P48431 AC004801.2-202ENST00000463559 283 ntBASIC3.43□□□□□ -1.86
SOX2P48431 AC011276.1-201ENST00000469688 323 ntBASIC3.43□□□□□ -1.86
SOX2P48431 RN7SL860P-201ENST00000473738 223 ntBASIC3.43□□□□□ -1.86
SOX2P48431 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SOX2P48431 AL359273.1-201ENST00000510918 627 ntBASIC3.43□□□□□ -1.86
SOX2P48431 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.43□□□□□ -1.86
SOX2P48431 RPL7P20-201ENST00000520308 745 ntBASIC3.43□□□□□ -1.86
SOX2P48431 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.43□□□□□ -1.86
SOX2P48431 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.43□□□□□ -1.86
SOX2P48431 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.43□□□□□ -1.86
SOX2P48431 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.43□□□□□ -1.86
SOX2P48431 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.43□□□□□ -1.86
SOX2P48431 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.43□□□□□ -1.86
SOX2P48431 AC037471.2-201ENST00000564941 598 ntBASIC3.43□□□□□ -1.86
SOX2P48431 MIR3921-201ENST00000577308 85 ntBASIC3.43□□□□□ -1.86
SOX2P48431 MIR5583-1-201ENST00000580941 59 ntBASIC3.43□□□□□ -1.86
SOX2P48431 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.43□□□□□ -1.86
SOX2P48431 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.43□□□□□ -1.86
SOX2P48431 MIR6868-201ENST00000611215 58 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms