Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 EDDM3CP-201ENST00000415977 425 ntBASIC2.24□□□□□ -2.05
CASQ1P31415 TAF13P2-201ENST00000416876 286 ntBASIC2.24□□□□□ -2.05
CASQ1P31415 Z93242.1-201ENST00000427102 353 ntBASIC2.24□□□□□ -2.05
CASQ1P31415 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.24□□□□□ -2.05
CASQ1P31415 TRIM60P13-201ENST00000432350 1283 ntBASIC2.24□□□□□ -2.05
CASQ1P31415 AC107083.1-201ENST00000439643 279 ntBASIC2.24□□□□□ -2.05
CASQ1P31415 AC026410.2-201ENST00000460281 156 ntBASIC2.24□□□□□ -2.05
CASQ1P31415 TRBV1-201ENST00000476502 284 ntBASIC2.24□□□□□ -2.05
CASQ1P31415 SNORA76.2-201ENST00000517095 137 ntBASIC2.24□□□□□ -2.05
CASQ1P31415 NACAP3-201ENST00000552100 481 ntBASIC2.24□□□□□ -2.05
CASQ1P31415 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.24□□□□□ -2.05
CASQ1P31415 VN1R92P-201ENST00000598511 928 ntBASIC2.24□□□□□ -2.05
CASQ1P31415 AC007038.2-201ENST00000608095 740 ntBASIC2.24□□□□□ -2.05
CASQ1P31415 AL731566.2-201ENST00000618971 317 ntBASIC2.24□□□□□ -2.05
CASQ1P31415 AC109809.1-201ENST00000619665 545 ntBASIC2.24□□□□□ -2.05
CASQ1P31415 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CASQ1P31415 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
CASQ1P31415 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CASQ1P31415 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CASQ1P31415 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CASQ1P31415 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
CASQ1P31415 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CASQ1P31415 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CASQ1P31415 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.23□□□□□ -2.05
CASQ1P31415 RNU6-486P-201ENST00000363116 107 ntBASIC2.23□□□□□ -2.05
CASQ1P31415 RNU6-353P-201ENST00000364266 108 ntBASIC2.23□□□□□ -2.05
CASQ1P31415 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.23□□□□□ -2.05
CASQ1P31415 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.23□□□□□ -2.05
CASQ1P31415 GTF2IP7-202ENST00000436677 309 ntBASIC2.23□□□□□ -2.05
CASQ1P31415 FABP5P14-201ENST00000437273 393 ntBASIC2.23□□□□□ -2.05
CASQ1P31415 AC092393.1-201ENST00000439625 742 ntBASIC2.23□□□□□ -2.05
CASQ1P31415 USP9YP8-201ENST00000441913 500 ntBASIC2.23□□□□□ -2.05
CASQ1P31415 AC002381.1-201ENST00000447049 280 ntBASIC2.23□□□□□ -2.05
CASQ1P31415 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.23□□□□□ -2.05
CASQ1P31415 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.23□□□□□ -2.05
CASQ1P31415 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.23□□□□□ -2.05
CASQ1P31415 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.23□□□□□ -2.05
CASQ1P31415 MIR4299-201ENST00000577899 72 ntBASIC2.23□□□□□ -2.05
CASQ1P31415 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.23□□□□□ -2.05
CASQ1P31415 AP002906.1-201ENST00000603405 233 ntBASIC2.23□□□□□ -2.05
CASQ1P31415 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.23□□□□□ -2.05
CASQ1P31415 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.23□□□□□ -2.05
CASQ1P31415 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CASQ1P31415 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.23□□□□□ -2.05
CASQ1P31415 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.23□□□□□ -2.05
CASQ1P31415 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
CASQ1P31415 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CASQ1P31415 AC005539.1-201ENST00000443768 1479 ntBASIC2.22□□□□□ -2.05
CASQ1P31415 RNU5E-8P-201ENST00000363502 116 ntBASIC2.22□□□□□ -2.05
CASQ1P31415 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.22□□□□□ -2.05
CASQ1P31415 SUGT1P1-201ENST00000379514 476 ntBASIC2.22□□□□□ -2.05
CASQ1P31415 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CASQ1P31415 RNU2-63P-201ENST00000410792 194 ntBASIC2.22□□□□□ -2.05
CASQ1P31415 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.22□□□□□ -2.05
CASQ1P31415 RPS24P7-201ENST00000416921 246 ntBASIC2.22□□□□□ -2.05
CASQ1P31415 DNAJC19P4-201ENST00000440115 345 ntBASIC2.22□□□□□ -2.05
CASQ1P31415 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.22□□□□□ -2.05
CASQ1P31415 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CASQ1P31415 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.22□□□□□ -2.05
CASQ1P31415 RPL23AP3-201ENST00000453844 468 ntBASIC2.22□□□□□ -2.05
CASQ1P31415 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.22□□□□□ -2.05
CASQ1P31415 RPS3P1-201ENST00000456781 192 ntBASIC2.22□□□□□ -2.05
CASQ1P31415 RPS27AP10-201ENST00000496103 208 ntBASIC2.22□□□□□ -2.05
CASQ1P31415 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CASQ1P31415 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.22□□□□□ -2.05
CASQ1P31415 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.22□□□□□ -2.05
CASQ1P31415 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.22□□□□□ -2.05
CASQ1P31415 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CASQ1P31415 MIR4666A-201ENST00000580160 79 ntBASIC2.22□□□□□ -2.05
CASQ1P31415 MIR5195-201ENST00000583555 115 ntBASIC2.22□□□□□ -2.05
CASQ1P31415 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.22□□□□□ -2.05
CASQ1P31415 AP001269.3-201ENST00000588718 329 ntBASIC2.22□□□□□ -2.05
CASQ1P31415 AC002545.1-201ENST00000592511 181 ntBASIC2.22□□□□□ -2.05
CASQ1P31415 AC024257.5-201ENST00000612739 531 ntBASIC2.22□□□□□ -2.05
CASQ1P31415 AL590099.1-201ENST00000615276 138 ntBASIC2.22□□□□□ -2.05
CASQ1P31415 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CASQ1P31415 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.21□□□□□ -2.06
CASQ1P31415 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CASQ1P31415 RNU6-932P-201ENST00000391108 106 ntBASIC2.21□□□□□ -2.06
CASQ1P31415 AL356432.1-201ENST00000405809 419 ntBASIC2.21□□□□□ -2.06
CASQ1P31415 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.21□□□□□ -2.06
CASQ1P31415 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.21□□□□□ -2.06
CASQ1P31415 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.21□□□□□ -2.06
CASQ1P31415 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.21□□□□□ -2.06
CASQ1P31415 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.21□□□□□ -2.06
CASQ1P31415 RPL23AP41-201ENST00000484754 458 ntBASIC2.21□□□□□ -2.06
CASQ1P31415 RNA5SP112-201ENST00000515937 99 ntBASIC2.21□□□□□ -2.06
CASQ1P31415 SCARNA16.3-201ENST00000516595 184 ntBASIC2.21□□□□□ -2.06
CASQ1P31415 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
CASQ1P31415 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.21□□□□□ -2.06
CASQ1P31415 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.21□□□□□ -2.06
CASQ1P31415 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.21□□□□□ -2.06
CASQ1P31415 AC027176.1-201ENST00000560204 514 ntBASIC2.21□□□□□ -2.06
CASQ1P31415 AC106782.4-201ENST00000568264 210 ntBASIC2.21□□□□□ -2.06
CASQ1P31415 AC090615.1-201ENST00000577519 154 ntBASIC2.21□□□□□ -2.06
CASQ1P31415 AC005229.3-201ENST00000603438 323 ntBASIC2.21□□□□□ -2.06
CASQ1P31415 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.21□□□□□ -2.06
CASQ1P31415 uc_338.14-201ENST00000613162 166 ntBASIC2.21□□□□□ -2.06
CASQ1P31415 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CASQ1P31415 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms