Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 ELOCP32-201ENST00000548625 324 ntBASIC3.41□□□□□ -1.86
HOXC13P31276 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXC13P31276 MIR3611-201ENST00000584484 83 ntBASIC3.41□□□□□ -1.86
HOXC13P31276 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXC13P31276 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXC13P31276 AC078899.3-201ENST00000599065 212 ntBASIC3.41□□□□□ -1.86
HOXC13P31276 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXC13P31276 AL158063.1-201ENST00000615349 536 ntBASIC3.41□□□□□ -1.86
HOXC13P31276 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.41□□□□□ -1.86
HOXC13P31276 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HOXC13P31276 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.4□□□□□ -1.86
HOXC13P31276 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.4□□□□□ -1.86
HOXC13P31276 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HOXC13P31276 Y_RNA.6-201ENST00000362350 114 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 RNU6-553P-201ENST00000364047 96 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 RNA5SP354-201ENST00000391247 136 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 PIGPP2-201ENST00000411569 458 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 RPS15AP6-201ENST00000420703 385 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 AL645937.1-202ENST00000421799 937 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 NDUFB4P7-201ENST00000423198 363 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 HMGN2P30-201ENST00000423237 256 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC13P31276 BX679664.1-201ENST00000434429 253 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 ARPC3P1-201ENST00000437218 533 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 AC006028.1-201ENST00000438379 402 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC13P31276 MTCO1P27-201ENST00000448269 226 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 MTND2P24-201ENST00000453434 806 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 HMGB1P36-201ENST00000487709 576 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXC13P31276 RNU6-1178P-201ENST00000516674 107 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 RNU6-1282P-201ENST00000516735 96 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 RNU6-798P-201ENST00000516912 103 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 HMGN1P28-201ENST00000521340 364 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.4□□□□□ -1.87
HOXC13P31276 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HOXC13P31276 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC13P31276 SETP2-201ENST00000553886 926 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXC13P31276 MIR3915-201ENST00000578518 97 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 AC015917.1-201ENST00000579654 510 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXC13P31276 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXC13P31276 AL031281.1-201ENST00000604049 488 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 AF250324.2-201ENST00000608299 610 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 AC004067.1-201ENST00000608733 700 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 AC072039.2-201ENST00000608883 439 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 AL592295.2-201ENST00000612578 206 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 AF246928.1-201ENST00000623768 87 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 AL137790.1-201ENST00000634283 177 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXC13P31276 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.4□□□□□ -1.87
HOXC13P31276 AC022336.2-201ENST00000568966 2538 ntBASIC3.4□□□□□ -1.87
HOXC13P31276 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HOXC13P31276 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC13P31276 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC13P31276 PWAR6-201ENST00000552334 4618 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXC13P31276 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC13P31276 AC010680.1-201ENST00000590024 3590 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 AC004520.1-201ENST00000608362 1413 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXC13P31276 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC13P31276 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC13P31276 RNU6-777P-201ENST00000364265 104 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 RNU6-637P-201ENST00000384050 107 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 RNU6-198P-201ENST00000384258 104 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 RNU5A-2P-201ENST00000384337 116 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 UBE2V1P2-201ENST00000397758 440 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC13P31276 RNU4-47P-201ENST00000410876 114 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 MTCO1P17-201ENST00000411522 491 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC13P31276 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXC13P31276 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC13P31276 OR2B8P-201ENST00000432841 938 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC13P31276 RPS24P1-201ENST00000438550 371 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 AC108734.1-201ENST00000439549 399 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 MTCO1P19-201ENST00000443487 500 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 MTCYBP1-201ENST00000454315 1119 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC13P31276 AL109741.2-201ENST00000455561 343 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 RPS27P29-201ENST00000463110 252 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HOXC13P31276 HSPE1P6-201ENST00000479457 291 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 AC093809.1-201ENST00000509155 340 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 AC109464.2-201ENST00000510242 943 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 MTND5P4-201ENST00000514978 288 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXC13P31276 NDUFB9P3-201ENST00000521269 501 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXC13P31276 CASP1P1-201ENST00000526345 212 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 AP003497.1-201ENST00000528472 562 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXC13P31276 AC087883.1-201ENST00000551882 391 ntBASIC3.39□□□□□ -1.87
HOXC13P31276 TRAV37-201ENST00000553906 342 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms